Description : DNA-directed RNA polymerase subunit alpha
Gene families : OG_02_0002952 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015105 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_250 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000018 | regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000228 | nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000470 | maturation of LSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001523 | retinoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001568 | blood vessel development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001758 | retinal dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001822 | kidney development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001889 | liver development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001936 | regulation of endothelial cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001947 | heart looping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002009 | morphogenesis of an epithelium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002072 | optic cup morphogenesis involved in camera-type eye development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002138 | retinoic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002181 | cytoplasmic translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002931 | response to ischemia | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003143 | embryonic heart tube morphogenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004028 | 3-chloroallyl aldehyde dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004029 | aldehyde dehydrogenase (NAD+) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004030 | aldehyde dehydrogenase [NAD(P)+] activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004745 | NAD-retinol dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005501 | retinoid binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005911 | cell-cell junction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006040 | amino sugar metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006067 | ethanol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006117 | acetaldehyde metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006282 | regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006304 | DNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006305 | DNA alkylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006306 | DNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006346 | DNA methylation-dependent heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006450 | regulation of translational fidelity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006775 | fat-soluble vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006776 | vitamin A metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007494 | midgut development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007584 | response to nutrient | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007626 | locomotory behavior | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008284 | positive regulation of cell population proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008631 | intrinsic apoptotic signaling pathway in response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008637 | apoptotic mitochondrial changes | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008774 | acetaldehyde dehydrogenase (acetylating) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008957 | phenylacetaldehyde dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009055 | electron transfer activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009448 | gamma-aminobutyric acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009449 | gamma-aminobutyric acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009506 | plasmodesma | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009954 | proximal/distal pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010038 | response to metal ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010569 | regulation of double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010597 | green leaf volatile biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014032 | neural crest cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014706 | striated muscle tissue development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015934 | large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015935 | small ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016331 | morphogenesis of embryonic epithelium | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016918 | retinal binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019115 | benzaldehyde dehydrogenase [NAD(P)+] activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019145 | aminobutyraldehyde dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019372 | lipoxygenase pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019840 | isoprenoid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019842 | vitamin binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021515 | cell differentiation in spinal cord | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021522 | spinal cord motor neuron differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021768 | nucleus accumbens development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021915 | neural tube development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021953 | central nervous system neuron differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021983 | pituitary gland development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0022625 | cytosolic large ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0022627 | cytosolic small ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030054 | cell junction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030182 | neuron differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030324 | lung development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030326 | embryonic limb morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030389 | fructosamine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030392 | fructosamine catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030424 | axon | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030522 | intracellular receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030534 | adult behavior | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030902 | hindbrain development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031016 | pancreas development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031048 | small non-coding RNA-dependent heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031507 | heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032040 | small-subunit processome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032355 | response to estradiol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032496 | response to lipopolysaccharide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032526 | response to retinoic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032570 | response to progesterone | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032838 | plasma membrane bounded cell projection cytoplasm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033189 | response to vitamin A | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033273 | response to vitamin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033574 | response to testosterone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034308 | primary alcohol metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035094 | response to nicotine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035107 | appendage morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035108 | limb morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035113 | embryonic appendage morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035115 | embryonic forelimb morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035136 | forelimb morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035239 | tube morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035295 | tube development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035634 | response to stilbenoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035799 | ureter maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036296 | response to increased oxygen levels | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042127 | regulation of cell population proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042472 | inner ear morphogenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042562 | hormone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042573 | retinoic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042574 | retinal metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042788 | polysomal ribosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042904 | 9-cis-retinoic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042905 | 9-cis-retinoic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043065 | positive regulation of apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043878 | glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044391 | ribosomal subunit | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045202 | synapse | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045727 | positive regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045903 | positive regulation of translational fidelity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046348 | amino sugar catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046686 | response to cadmium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048149 | behavioral response to ethanol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048384 | retinoic acid receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048385 | regulation of retinoic acid receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048386 | positive regulation of retinoic acid receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048545 | response to steroid hormone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048565 | digestive tract development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048566 | embryonic digestive tract development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048568 | embryonic organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048729 | tissue morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048732 | gland development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048738 | cardiac muscle tissue development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048799 | animal organ maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048857 | neural nucleus development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048864 | stem cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050678 | regulation of epithelial cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050727 | regulation of inflammatory response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050885 | neuromuscular process controlling balance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050905 | neuromuscular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051260 | protein homooligomerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051262 | protein tetramerization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051287 | NAD binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051289 | protein homotetramerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055093 | response to hyperoxia | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060004 | reflex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060013 | righting reflex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060166 | olfactory pit development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060324 | face development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060429 | epithelium development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060537 | muscle tissue development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060562 | epithelial tube morphogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070161 | anchoring junction | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070324 | thyroid hormone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070384 | Harderian gland development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070403 | NAD+ binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070404 | NADH binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070828 | heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071300 | cellular response to retinoic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071310 | cellular response to organic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071398 | cellular response to fatty acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071495 | cellular response to endogenous stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080188 | gene silencing by RNA-directed DNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090242 | retinoic acid receptor signaling pathway involved in somitogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097014 | ciliary plasm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097190 | apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097193 | intrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099568 | cytoplasmic region | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106373 | 3-deoxyglucosone dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110095 | cellular detoxification of aldehyde | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140718 | facultative heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901654 | response to ketone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901701 | cellular response to oxygen-containing compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902882 | regulation of response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904400 | response to Thyroid stimulating hormone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904401 | cellular response to Thyroid stimulating hormone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904587 | response to glycoprotein | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904588 | cellular response to glycoprotein | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904638 | response to resveratrol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904639 | cellular response to resveratrol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990748 | cellular detoxification | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990932 | 5.8S rRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000779 | regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |