SOLTUB.AGRIA.G00000015243

Description : Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial

Gene families : OG_02_0022526 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015243
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_64

Type	GO Term	Name	Evidence	Source
MF	GO:0000104	succinate dehydrogenase activity	None	Extended
CC	GO:0000329	fungal-type vacuole membrane	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	IEA	AHRD
CC	GO:0005774	vacuolar membrane	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006099	tricarboxylic acid cycle	IEA	AHRD
BP	GO:0006105	succinate metabolic process	IEA	AHRD
BP	GO:0006121	mitochondrial electron transport, succinate to ubiquinone	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008177	succinate dehydrogenase (ubiquinone) activity	IEA	AHRD
MF	GO:0008270	zinc ion binding	IEA	AHRD
MF	GO:0009055	electron transfer activity	IEA	AHRD
BP	GO:0009060	aerobic respiration	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016635	oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor	None	Extended
BP	GO:0019646	aerobic electron transport chain	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
BP	GO:0022904	respiratory electron transport chain	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043648	dicarboxylic acid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
CC	GO:0045257	succinate dehydrogenase complex (ubiquinone)	None	Extended
CC	GO:0045281	succinate dehydrogenase complex	None	Extended
CC	GO:0045283	fumarate reductase complex	None	Extended
BP	GO:0045333	cellular respiration	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048038	quinone binding	None	Extended
MF	GO:0048039	ubiquinone binding	IEA	AHRD
MF	GO:0051536	iron-sulfur cluster binding	None	Extended
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEA	AHRD
MF	GO:0051538	3 iron, 4 sulfur cluster binding	IEA	AHRD
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEA	AHRD
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098798	mitochondrial protein-containing complex	None	Extended
CC	GO:0098800	inner mitochondrial membrane protein complex	None	Extended
CC	GO:0098803	respiratory chain complex	None	Extended
CC	GO:0098852	lytic vacuole membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000109	nucleotide-excision repair complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000162	tryptophan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000720	pyrimidine dimer repair by nucleotide-excision repair	IEP	Predict GO terms from Neighborhoods
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001101	response to acid chemical	IEP	Predict GO terms from Neighborhoods
MF	GO:0001216	DNA-binding transcription activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002213	defense response to insect	IEP	Predict GO terms from Neighborhoods
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006289	nucleotide-excision repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006290	pyrimidine dimer repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006568	tryptophan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006586	indolalkylamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006722	triterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006723	cuticle hydrocarbon biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006885	regulation of pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007035	vacuolar acidification	IEP	Predict GO terms from Neighborhoods
BP	GO:0007154	cell communication	IEP	Predict GO terms from Neighborhoods
MF	GO:0008553	P-type proton-exporting transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009073	aromatic amino acid family biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009270	response to humidity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009414	response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009415	response to water	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009625	response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:0009631	cold acclimation	IEP	Predict GO terms from Neighborhoods
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009682	induced systemic resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009759	indole glucosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009819	drought recovery	IEP	Predict GO terms from Neighborhoods
BP	GO:0009825	multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009913	epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009960	endosperm development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010030	positive regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010104	regulation of ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010162	seed dormancy process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010377	guard cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0010438	cellular response to sulfur starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010439	regulation of glucosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010444	guard mother cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010466	negative regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0014074	response to purine-containing compound	IEP	Predict GO terms from Neighborhoods
MF	GO:0015662	P-type ion transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016125	sterol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016135	saponin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019207	kinase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019209	kinase activator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019216	regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019742	pentacyclic triterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019887	protein kinase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022611	dormancy process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030295	protein kinase activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030414	peptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030641	regulation of cellular pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0030855	epithelial cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031057	negative regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031061	negative regulation of histone methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0031176	endo-1,4-beta-xylanase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031399	regulation of protein modification process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0031930	mitochondria-nucleus signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032147	activation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033674	positive regulation of kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035017	cuticle pattern formation	IEP	Predict GO terms from Neighborhoods
MF	GO:0036203	taxoid 14-beta-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Predict GO terms from Neighborhoods
BP	GO:0042304	regulation of fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042343	indole glucosinolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042762	regulation of sulfur metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043455	regulation of secondary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045165	cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0045723	positive regulation of fatty acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045860	positive regulation of protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045923	positive regulation of fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046219	indolalkylamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046683	response to organophosphorus	IEP	Predict GO terms from Neighborhoods
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0048226	Casparian strip	IEP	Predict GO terms from Neighborhoods
BP	GO:0048317	seed morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048580	regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048658	anther wall tapetum development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051094	positive regulation of developmental process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051239	regulation of multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051452	intracellular pH reduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0051453	regulation of intracellular pH	IEP	Predict GO terms from Neighborhoods
BP	GO:0051591	response to cAMP	IEP	Predict GO terms from Neighborhoods
BP	GO:0051782	negative regulation of cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0052386	cell wall thickening	IEP	Predict GO terms from Neighborhoods
BP	GO:0052482	defense response by cell wall thickening	IEP	Predict GO terms from Neighborhoods
BP	GO:0052542	defense response by callose deposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0052543	callose deposition in cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0052544	defense response by callose deposition in cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0061085	regulation of histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061086	negative regulation of histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0061134	peptidase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061135	endopeptidase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0065009	regulation of molecular function	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0070297	regulation of phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
BP	GO:0070887	cellular response to chemical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071320	cellular response to cAMP	IEP	Predict GO terms from Neighborhoods
BP	GO:0071365	cellular response to auxin stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071495	cellular response to endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071496	cellular response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0080091	regulation of raffinose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090547	response to low humidity	IEP	Predict GO terms from Neighborhoods
MF	GO:0097599	xylanase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102373	uvaol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102374	ursolic aldehyde 28-monooxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140358	P-type transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900377	negative regulation of secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900384	regulation of flavonol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901332	negative regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901657	glycosyl compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1901957	regulation of cutin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903085	regulation of sinapate ester biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903086	negative regulation of sinapate ester biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904400	response to Thyroid stimulating hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:1904401	cellular response to Thyroid stimulating hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:1904587	response to glycoprotein	IEP	Predict GO terms from Neighborhoods
BP	GO:1904588	cellular response to glycoprotein	IEP	Predict GO terms from Neighborhoods
BP	GO:1905255	regulation of RNA binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1990069	stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:2000023	regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000026	regulation of multicellular organismal development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000038	regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000069	regulation of post-embryonic root development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004489	Succ_DH/fum_Rdtase_Fe-S	62	285
IPR025192	Succ_DH/fum_Rdtase_N	60	165
IPR036010	2Fe-2S_ferredoxin-like_sf	57	160

External Links

No external refs found!

SOLTUB.AGRIA.G00000015243

Expression Profile

Co-expression Networks

Functional Annotation