SOLTUB.AGRIA.G00000015395


Description : Shikimate kinase


Gene families : OG_02_0005934 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015395
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_26


Type GO Term Name Evidence Source
MF GO:0004765 shikimate kinase activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
BP GO:0008652 cellular amino acid biosynthetic process IEA AHRD
BP GO:0009073 aromatic amino acid family biosynthetic process IEA AHRD
BP GO:0009423 chorismate biosynthetic process IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
BP GO:0009657 plastid organization IEA AHRD
BP GO:0016310 phosphorylation IEA AHRD
BP GO:0019632 shikimate metabolic process IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0001845 phagolysosome assembly IEP Predict GO terms from Neighborhoods
CC GO:0002178 palmitoyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0002229 defense response to oomycetes IEP Predict GO terms from Neighborhoods
BP GO:0002240 response to molecule of oomycetes origin IEP Predict GO terms from Neighborhoods
BP GO:0003032 detection of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0003846 2-acylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0003866 3-phosphoshikimate 1-carboxyvinyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004024 alcohol dehydrogenase activity, zinc-dependent IEP Predict GO terms from Neighborhoods
MF GO:0004107 chorismate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004398 histidine decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0004464 leukotriene-C4 synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004619 phosphoglycerate mutase activity IEP Predict GO terms from Neighborhoods
MF GO:0004622 lysophospholipase activity IEP Predict GO terms from Neighborhoods
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Predict GO terms from Neighborhoods
MF GO:0005356 glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005358 high-affinity glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
BP GO:0005513 detection of calcium ion IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
CC GO:0005769 early endosome IEP Predict GO terms from Neighborhoods
CC GO:0005829 cytosol IEP Predict GO terms from Neighborhoods
CC GO:0005834 heterotrimeric G-protein complex IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0006066 alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006081 cellular aldehyde metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Predict GO terms from Neighborhoods
BP GO:0006576 cellular biogenic amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006580 ethanolamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006690 icosanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006691 leukotriene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0007623 circadian rhythm IEP Predict GO terms from Neighborhoods
MF GO:0008198 ferrous iron binding IEP Predict GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0008356 asymmetric cell division IEP Predict GO terms from Neighborhoods
MF GO:0008506 sucrose:proton symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009120 deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009414 response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:0009415 response to water IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
CC GO:0009534 chloroplast thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0009593 detection of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009608 response to symbiont IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
MF GO:0009669 sucrose:cation symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0009679 hexose:proton symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009743 response to carbohydrate IEP Predict GO terms from Neighborhoods
BP GO:0009746 response to hexose IEP Predict GO terms from Neighborhoods
BP GO:0009749 response to glucose IEP Predict GO terms from Neighborhoods
BP GO:0009800 cinnamic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009803 cinnamic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009808 lignin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009809 lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009926 auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0010038 response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0010043 response to zinc ion IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010193 response to ozone IEP Predict GO terms from Neighborhoods
BP GO:0010200 response to chitin IEP Predict GO terms from Neighborhoods
BP GO:0010243 response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0010597 green leaf volatile biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0015086 cadmium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015185 gamma-aminobutyric acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015578 mannose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015751 arabinose transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015802 basic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015812 gamma-aminobutyric acid transport IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
BP GO:0016098 monoterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016099 monoterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016138 glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016145 S-glycoside catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016207 4-coumarate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016710 trans-cinnamate 4-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016830 carbon-carbon lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016841 ammonia-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predict GO terms from Neighborhoods
BP GO:0018230 peptidyl-L-cysteine S-palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018231 peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine IEP Predict GO terms from Neighborhoods
BP GO:0018342 protein prenylation IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
MF GO:0018858 benzoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0019372 lipoxygenase pathway IEP Predict GO terms from Neighborhoods
MF GO:0019706 protein-cysteine S-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019707 protein-cysteine S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019722 calcium-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019759 glycosinolate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019762 glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Predict GO terms from Neighborhoods
BP GO:0019932 second-messenger-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0022610 obsolete biological adhesion IEP Predict GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0031000 response to caffeine IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0031524 menthol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031525 menthol biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0031976 plastid thylakoid IEP Predict GO terms from Neighborhoods
BP GO:0033494 ferulate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034308 primary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034605 cellular response to heat IEP Predict GO terms from Neighborhoods
CC GO:0035003 subapical complex IEP Predict GO terms from Neighborhoods
MF GO:0035671 enone reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042221 response to chemical IEP Predict GO terms from Neighborhoods
BP GO:0042344 indole glucosinolate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0042409 caffeoyl-CoA O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042439 ethanolamine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042882 L-arabinose transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0042900 arabinose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0043849 Ras palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0044106 cellular amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0045548 phenylalanine ammonia-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0046104 thymidine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046125 pyrimidine deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046184 aldehyde biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046292 formaldehyde metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046294 formaldehyde catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046566 DOPA dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0047037 salutaridine reductase (NADPH) activity IEP Predict GO terms from Neighborhoods
MF GO:0047501 (+)-neomenthol dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0048511 rhythmic process IEP Predict GO terms from Neighborhoods
BP GO:0048736 appendage development IEP Predict GO terms from Neighborhoods
BP GO:0048825 cotyledon development IEP Predict GO terms from Neighborhoods
MF GO:0050297 stizolobate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050502 cis-zeatin O-beta-D-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050563 trans-feruloyl-CoA synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Predict GO terms from Neighborhoods
BP GO:0050826 response to freezing IEP Predict GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051260 protein homooligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051592 response to calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051606 detection of stimulus IEP Predict GO terms from Neighborhoods
MF GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0052581 (-)-isopiperitenone reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0055055 D-glucose:proton symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0055056 D-glucose transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0060173 limb development IEP Predict GO terms from Neighborhoods
BP GO:0062211 root regeneration IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Predict GO terms from Neighborhoods
BP GO:0070483 detection of hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0070574 cadmium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0071366 cellular response to indolebutyric acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071454 cellular response to anoxia IEP Predict GO terms from Neighborhoods
BP GO:0071852 fungal-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0080026 response to indolebutyric acid IEP Predict GO terms from Neighborhoods
BP GO:0080033 response to nitrite IEP Predict GO terms from Neighborhoods
MF GO:0080076 caffeoyl CoA:S-adenosyl-L-methionine O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0090333 regulation of stomatal closure IEP Predict GO terms from Neighborhoods
MF GO:0090430 caffeoyl-CoA: alcohol caffeoyl transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0097354 prenylation IEP Predict GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Predict GO terms from Neighborhoods
MF GO:0106286 (E)-caffeate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0106290 trans-cinnamate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0110095 cellular detoxification of aldehyde IEP Predict GO terms from Neighborhoods
BP GO:0120254 olefinic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0120255 olefinic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900037 regulation of cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:1900039 positive regulation of cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:1900992 (-)-secologanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900994 (-)-secologanin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901140 p-coumaryl alcohol transport IEP Predict GO terms from Neighborhoods
BP GO:1901160 primary amino compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901657 glycosyl compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901698 response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1901701 cellular response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1901804 beta-glucoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901806 beta-glucoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1904659 glucose transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:1905360 GTPase complex IEP Predict GO terms from Neighborhoods
BP GO:1990748 cellular detoxification IEP Predict GO terms from Neighborhoods
BP GO:2000030 regulation of response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:2000069 regulation of post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
BP GO:2000603 regulation of secondary growth IEP Predict GO terms from Neighborhoods
BP GO:2000605 positive regulation of secondary growth IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR031322 Shikimate/glucono_kinase 113 270
IPR027417 P-loop_NTPase 105 251
No external refs found!