1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000015464

SOLTUB.AGRIA.G00000015464


Description : Arginine decarboxylase


Gene families : OG_02_0006327 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015464
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_229


Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA AHRD
BP GO:0034641 cellular nitrogen compound metabolic process IEA AHRD
BP GO:0044238 primary metabolic process IEA AHRD
BP GO:1901564 organonitrogen compound metabolic process IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predict GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0009507 chloroplast IEP Predict GO terms from Neighborhoods
CC GO:0009536 plastid IEP Predict GO terms from Neighborhoods
BP GO:0010239 chloroplast mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010305 leaf vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016556 mRNA modification IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
BP GO:0031425 chloroplast RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048564 photosystem I assembly IEP Predict GO terms from Neighborhoods
BP GO:1900865 chloroplast RNA modification IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008286 Prn/Lys/Arg_de-COase_C 466 537
IPR036633 Prn/Lys/Arg_de-COase_C_sf 412 555
IPR000310 Orn/Lys/Arg_deCO2ase_major_dom 74 373
IPR015424 PyrdxlP-dep_Trfase 74 453
No external refs found!