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  5. SOLTUB.AGRIA.G00000015671

SOLTUB.AGRIA.G00000015671


Description : B3 domain-containing protein rem17


Gene families : OG_02_0005949 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015671
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_118


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
CC GO:0043231 intracellular membrane-bounded organelle IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0000578 embryonic axis specification IEP Predict GO terms from Neighborhoods
MF GO:0005506 iron ion binding IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006768 biotin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006783 heme biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0007549 dosage compensation IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0009048 dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0009102 biotin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009756 carbohydrate mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0009798 axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009880 embryonic pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009901 anther dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010182 sugar mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
BP GO:0019217 regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
BP GO:0033013 tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0040029 epigenetic regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0042168 heme metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046148 pigment biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0046890 regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predict GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Predict GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Predict GO terms from Neighborhoods
BP GO:0060816 random inactivation of X chromosome IEP Predict GO terms from Neighborhoods
MF GO:0061630 ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0071000 response to magnetism IEP Predict GO terms from Neighborhoods
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0097428 protein maturation by iron-sulfur cluster transfer IEP Predict GO terms from Neighborhoods
BP GO:0106035 protein maturation by [4Fe-4S] cluster transfer IEP Predict GO terms from Neighborhoods
BP GO:1900095 regulation of dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR015300 DNA-bd_pseudobarrel_sf 153 241
IPR015300 DNA-bd_pseudobarrel_sf 12 106
IPR003340 B3_DNA-bd 14 100
IPR003340 B3_DNA-bd 168 243
No external refs found!