SOLTUB.AGRIA.G00000015706

Description : U-box domain-containing protein 27

Gene families : OG_02_0011634 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000015706
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_98

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002252	immune effector process	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002679	respiratory burst involved in defense response	IEA	AHRD
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002683	negative regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010200	response to chitin	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016567	protein ubiquitination	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	IEA	AHRD
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032870	cellular response to hormone stimulus	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
MF	GO:0033612	receptor serine/threonine kinase binding	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
BP	GO:0042981	regulation of apoptotic process	None	Extended
BP	GO:0043066	negative regulation of apoptotic process	IEA	AHRD
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045730	respiratory burst	None	Extended
BP	GO:0047484	regulation of response to osmotic stress	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048527	lateral root development	IEA	AHRD
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048586	regulation of long-day photoperiodism, flowering	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050777	negative regulation of immune response	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051865	protein autoubiquitination	IEA	AHRD
BP	GO:0060548	negative regulation of cell death	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0062197	cellular response to chemical stress	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEA	AHRD
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071215	cellular response to abscisic acid stimulus	IEA	AHRD
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	None	Extended
BP	GO:0071470	cellular response to osmotic stress	None	Extended
BP	GO:0071472	cellular response to salt stress	IEA	AHRD
BP	GO:0071495	cellular response to endogenous stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0097306	cellular response to alcohol	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0099402	plant organ development	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1900457	regulation of brassinosteroid mediated signaling pathway	IEA	AHRD
BP	GO:1901000	regulation of response to salt stress	None	Extended
BP	GO:1901001	negative regulation of response to salt stress	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:2000028	regulation of photoperiodism, flowering	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0000976	transcription cis-regulatory region binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003690	double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005768	endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006470	protein dephosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006782	protoporphyrinogen IX biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006972	hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006979	response to oxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007165	signal transduction	IEP	Predict GO terms from Neighborhoods
MF	GO:0008883	glutamyl-tRNA reductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009409	response to cold	IEP	Predict GO terms from Neighborhoods
BP	GO:0009611	response to wounding	IEP	Predict GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009642	response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009643	photosynthetic acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009846	pollen germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009991	response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0010029	regulation of seed germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010045	response to nickel cation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010117	photoprotection	IEP	Predict GO terms from Neighborhoods
BP	GO:0010191	mucilage metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010192	mucilage biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010215	cellulose microfibril organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010440	stomatal lineage progression	IEP	Predict GO terms from Neighborhoods
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015117	thiosulfate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015131	oxaloacetate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015139	alpha-ketoglutarate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015140	malate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015141	succinate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015709	thiosulfate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015729	oxaloacetate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015743	malate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015744	succinate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016311	dephosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016763	pentosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016791	phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0017046	peptide hormone binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0017077	oxidative phosphorylation uncoupler activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019187	beta-1,4-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031349	positive regulation of defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0032504	multicellular organism reproduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0042538	hyperosmotic salinity response	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042631	cellular response to water deprivation	IEP	Predict GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045489	pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046501	protoporphyrinogen IX metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047259	glucomannan 4-beta-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047517	1,4-beta-D-xylan synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050832	defense response to fungus	IEP	Predict GO terms from Neighborhoods
MF	GO:0051427	hormone receptor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051428	peptide hormone receptor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051753	mannan synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052636	arabinosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0062211	root regeneration	IEP	Predict GO terms from Neighborhoods
BP	GO:0070726	cell wall assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071229	cellular response to acid chemical	IEP	Predict GO terms from Neighborhoods
BP	GO:0071248	cellular response to metal ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071289	cellular response to nickel ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071422	succinate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071423	malate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071462	cellular response to water stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071668	plant-type cell wall assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0080183	response to photooxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090548	response to nitrate starvation	IEP	Predict GO terms from Neighborhoods
CC	GO:0098791	Golgi apparatus subcompartment	IEP	Predict GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900036	positive regulation of cellular response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:1900140	regulation of seedling development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901141	regulation of lignin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901333	positive regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:1902074	response to salt	IEP	Predict GO terms from Neighborhoods
BP	GO:1902356	oxaloacetate(2-) transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902358	sulfate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902584	positive regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
CC	GO:1990531	phospholipid-translocating ATPase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000022	regulation of jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2000070	regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000280	regulation of root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	13	83
IPR016024	ARM-type_fold	115	391

External Links

No external refs found!

SOLTUB.AGRIA.G00000015706

Expression Profile

Co-expression Networks

Functional Annotation