| BP | GO:0000082 | G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000422 | autophagy of mitochondrion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000776 | kinetochore | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002237 | response to molecule of bacterial origin | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004930 | G protein-coupled receptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006356 | regulation of transcription by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006482 | protein demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006497 | protein lipidation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007186 | G protein-coupled receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008214 | protein dealkylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008502 | melatonin receptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009609 | response to symbiotic bacterium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009877 | nodulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009894 | regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009896 | positive regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009954 | proximal/distal pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009963 | positive regulation of flavonoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010119 | regulation of stomatal movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010267 | ta-siRNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010445 | nuclear dicing body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010508 | positive regulation of autophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010589 | leaf proximal/distal pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016441 | post-transcriptional gene silencing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016577 | histone demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019236 | response to pheromone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030422 | siRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031054 | pre-miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031057 | negative regulation of histone modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031329 | regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031331 | positive regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031445 | regulation of heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031452 | negative regulation of heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031539 | positive regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031540 | regulation of anthocyanin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031542 | positive regulation of anthocyanin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031648 | protein destabilization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032266 | phosphatidylinositol-3-phosphate binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032451 | demethylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032452 | histone demethylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032454 | histone H3-methyl-lysine-9 demethylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033169 | histone H3-K9 demethylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033612 | receptor serine/threonine kinase binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034045 | phagophore assembly site membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034497 | protein localization to phagophore assembly site | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035064 | methylated histone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035065 | regulation of histone acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035067 | negative regulation of histone acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035194 | post-transcriptional gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035195 | miRNA-mediated gene silencing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035198 | miRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035279 | miRNA-mediated gene silencing by mRNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035574 | histone H4-K20 demethylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035575 | histone H4-methyl-lysine-20 demethylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043130 | ubiquitin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044770 | cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044772 | mitotic cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044804 | autophagy of nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044843 | cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045943 | positive regulation of transcription by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048568 | embryonic organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048579 | negative regulation of long-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048585 | negative regulation of response to stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048586 | regulation of long-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050779 | RNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051864 | histone H3-methyl-lysine-36 demethylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061014 | positive regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061157 | mRNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061187 | regulation of rDNA heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061188 | negative regulation of ribosomal DNA heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061726 | mitochondrion disassembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061980 | regulatory RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0062078 | TSC1-TSC2 complex binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070076 | histone lysine demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070544 | histone H3-K36 demethylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070696 | transmembrane receptor protein serine/threonine kinase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070988 | demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071557 | histone H3-K27 demethylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0071558 | histone H3-tri/di-methyl-lysine-27 demethylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080006 | internode patterning | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080025 | phosphatidylinositol-3,5-bisphosphate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090227 | regulation of red or far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090229 | negative regulation of red or far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090333 | regulation of stomatal closure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120261 | regulation of heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120262 | negative regulation of heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140034 | methylation-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140457 | protein demethylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901983 | regulation of protein acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901984 | negative regulation of protein acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902275 | regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903008 | organelle disassembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1904408 | melatonin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905268 | negative regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000028 | regulation of photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000756 | regulation of peptidyl-lysine acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000757 | negative regulation of peptidyl-lysine acetylation | IEP | Predict GO terms from Neighborhoods |