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  5. SOLTUB.AGRIA.G00000016229

SOLTUB.AGRIA.G00000016229


Description : GATA transcription factor 25


Gene families : OG_02_0009010 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016229
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_30


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000118 histone deacetylase complex IEP Predict GO terms from Neighborhoods
BP GO:0000272 polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0000776 kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0001678 cellular glucose homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0002230 positive regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0002244 hematopoietic progenitor cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Predict GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006476 protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0006505 GPI anchor metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006507 GPI anchor release IEP Predict GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Predict GO terms from Neighborhoods
BP GO:0007411 axon guidance IEP Predict GO terms from Neighborhoods
BP GO:0008045 motor neuron axon guidance IEP Predict GO terms from Neighborhoods
BP GO:0009268 response to pH IEP Predict GO terms from Neighborhoods
BP GO:0009411 response to UV IEP Predict GO terms from Neighborhoods
BP GO:0009615 response to virus IEP Predict GO terms from Neighborhoods
BP GO:0009627 systemic acquired resistance IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009723 response to ethylene IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
BP GO:0009827 plant-type cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0009830 cell wall modification involved in abscission IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009901 anther dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010047 fruit dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010224 response to UV-B IEP Predict GO terms from Neighborhoods
BP GO:0010393 galacturonan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010447 response to acidic pH IEP Predict GO terms from Neighborhoods
MF GO:0010542 nitrate efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010564 regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0010971 positive regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0015108 chloride transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015112 nitrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015513 high-affinity secondary active nitrite transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015706 nitrate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016575 histone deacetylation IEP Predict GO terms from Neighborhoods
CC GO:0016580 Sin3 complex IEP Predict GO terms from Neighborhoods
MF GO:0016752 sinapoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016753 O-sinapoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016754 sinapoylglucose-malate O-sinapoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
CC GO:0017053 transcription repressor complex IEP Predict GO terms from Neighborhoods
MF GO:0019863 IgE binding IEP Predict GO terms from Neighborhoods
MF GO:0019865 immunoglobulin binding IEP Predict GO terms from Neighborhoods
BP GO:0021532 neural tube patterning IEP Predict GO terms from Neighborhoods
BP GO:0021895 cerebral cortex neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0021953 central nervous system neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Predict GO terms from Neighborhoods
BP GO:0030178 negative regulation of Wnt signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0030516 regulation of axon extension IEP Predict GO terms from Neighborhoods
CC GO:0031012 extracellular matrix IEP Predict GO terms from Neighborhoods
BP GO:0031537 regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031937 obsolete positive regulation of chromatin silencing IEP Predict GO terms from Neighborhoods
BP GO:0035065 regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035601 protein deacylation IEP Predict GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0042754 negative regulation of circadian rhythm IEP Predict GO terms from Neighborhoods
BP GO:0042938 dipeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0043392 negative regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress IEP Predict GO terms from Neighborhoods
BP GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0043620 regulation of DNA-templated transcription in response to stress IEP Predict GO terms from Neighborhoods
CC GO:0043667 pollen wall IEP Predict GO terms from Neighborhoods
BP GO:0044277 cell wall disassembly IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045488 pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045490 pectin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045664 regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045666 positive regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045787 positive regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047911 galacturan 1,4-alpha-galacturonidase activity IEP Predict GO terms from Neighborhoods
BP GO:0048868 pollen tube development IEP Predict GO terms from Neighborhoods
BP GO:0050688 regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050691 regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0051101 regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051595 response to methylglyoxal IEP Predict GO terms from Neighborhoods
MF GO:0052793 pectin acetylesterase activity IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0070822 Sin3-type complex IEP Predict GO terms from Neighborhoods
BP GO:0071322 cellular response to carbohydrate stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071326 cellular response to monosaccharide stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071331 cellular response to hexose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071333 cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0071944 cell periphery IEP Predict GO terms from Neighborhoods
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090068 positive regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0097305 response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:0097485 neuron projection guidance IEP Predict GO terms from Neighborhoods
BP GO:0098732 macromolecule deacylation IEP Predict GO terms from Neighborhoods
BP GO:0110126 phloem loading IEP Predict GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140416 transcription regulator inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0140678 molecular function inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:1900180 regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900181 negative regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1901349 glucosinolate transport IEP Predict GO terms from Neighborhoods
BP GO:1901674 regulation of histone H3-K27 acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901675 negative regulation of histone H3-K27 acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901983 regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1902075 cellular response to salt IEP Predict GO terms from Neighborhoods
BP GO:1902476 chloride transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902751 positive regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000033 regulation of seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:2000034 regulation of seed maturation IEP Predict GO terms from Neighborhoods
BP GO:2000677 regulation of transcription regulatory region DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000678 negative regulation of transcription regulatory region DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR010399 Tify_dom 70 98
IPR000679 Znf_GATA 201 236
IPR010402 CCT_domain 131 160
No external refs found!