SOLTUB.AGRIA.G00000016434

Description : Cyclin D3-1

Gene families : OG_02_0009025 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016434
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_200

Type	GO Term	Name	Evidence	Source
BP	GO:0000082	G1/S transition of mitotic cell cycle	IEA	AHRD
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IEA	AHRD
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010444	guard mother cell differentiation	IEA	AHRD
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044770	cell cycle phase transition	None	Extended
BP	GO:0044772	mitotic cell cycle phase transition	None	Extended
BP	GO:0044843	cell cycle G1/S phase transition	None	Extended
BP	GO:0048316	seed development	IEA	AHRD
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1900618	regulation of shoot system morphogenesis	None	Extended
BP	GO:1901371	regulation of leaf morphogenesis	IEA	AHRD
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1905421	regulation of plant organ morphogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001894	tissue homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0004312	fatty acid synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0005884	actin filament	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006334	nucleosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0006972	hyperosmotic response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007639	homeostasis of number of meristem cells	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009534	chloroplast thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009627	systemic acquired resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009653	anatomical structure morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009741	response to brassinosteroid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009755	hormone-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010068	protoderm histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010075	regulation of meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010226	response to lithium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010371	regulation of gibberellin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015026	coreceptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016297	acyl-[acyl-carrier-protein] hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030054	cell junction	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
BP	GO:0031539	positive regulation of anthocyanin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031542	positive regulation of anthocyanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031976	plastid thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0042023	DNA endoreduplication	IEP	Predict GO terms from Neighborhoods
BP	GO:0042538	hyperosmotic salinity response	IEP	Predict GO terms from Neighborhoods
BP	GO:0043392	negative regulation of DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044786	cell cycle DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0045168	cell-cell signaling involved in cell fate commitment	IEP	Predict GO terms from Neighborhoods
BP	GO:0045730	respiratory burst	IEP	Predict GO terms from Neighborhoods
CC	GO:0048046	apoplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048574	long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048629	trichome patterning	IEP	Predict GO terms from Neighborhoods
BP	GO:0048638	regulation of developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048873	homeostasis of number of cells within a tissue	IEP	Predict GO terms from Neighborhoods
BP	GO:0055073	cadmium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055078	sodium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061687	detoxification of inorganic compound	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0071585	detoxification of cadmium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071695	anatomical structure maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098754	detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:0099402	plant organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:1901703	protein localization involved in auxin polar transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000039	regulation of trichome morphogenesis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004367	Cyclin_C-dom	180	285
IPR036915	Cyclin-like_sf	43	178
IPR036915	Cyclin-like_sf	162	275
IPR006671	Cyclin_N	49	178

External Links

No external refs found!

SOLTUB.AGRIA.G00000016434

Expression Profile

Co-expression Networks

Functional Annotation