SOLTUB.AGRIA.G00000001696

Description : Transcription antitermination protein NusB

Gene families : OG_02_0011976 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001696
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_227

Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	None	Extended
MF	GO:0000166	nucleotide binding	IEA	AHRD
BP	GO:0000270	peptidoglycan metabolic process	None	Extended
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEA	AHRD
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
BP	GO:0001934	positive regulation of protein phosphorylation	IEA	AHRD
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002683	negative regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	AHRD
MF	GO:0003677	DNA binding	IEA	AHRD
MF	GO:0003697	single-stranded DNA binding	IEA	AHRD
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0003723	RNA binding	IEA	AHRD
MF	GO:0003724	RNA helicase activity	IEA	AHRD
MF	GO:0003779	actin binding	IEA	AHRD
MF	GO:0003796	lysozyme activity	IEA	AHRD
MF	GO:0003824	catalytic activity	IEA	AHRD
MF	GO:0003887	DNA-directed DNA polymerase activity	IEA	AHRD
MF	GO:0003896	DNA primase activity	IEA	AHRD
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEA	AHRD
MF	GO:0003933	GTP cyclohydrolase activity	None	Extended
MF	GO:0003934	GTP cyclohydrolase I activity	IEA	AHRD
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004176	ATP-dependent peptidase activity	IEA	AHRD
MF	GO:0004252	serine-type endopeptidase activity	IEA	AHRD
MF	GO:0004386	helicase activity	IEA	AHRD
MF	GO:0004518	nuclease activity	IEA	AHRD
MF	GO:0004519	endonuclease activity	IEA	AHRD
MF	GO:0004520	endodeoxyribonuclease activity	IEA	AHRD
MF	GO:0004536	deoxyribonuclease activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005104	fibroblast growth factor receptor binding	IEA	AHRD
MF	GO:0005198	structural molecule activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	IEA	AHRD
CC	GO:0005615	extracellular space	IEA	AHRD
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005667	transcription regulator complex	IEA	AHRD
CC	GO:0005730	nucleolus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005856	cytoskeleton	IEA	AHRD
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006027	glycosaminoglycan catabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006220	pyrimidine nucleotide metabolic process	None	Extended
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	None	Extended
BP	GO:0006231	dTMP biosynthetic process	IEA	AHRD
BP	GO:0006259	DNA metabolic process	IEA	AHRD
BP	GO:0006260	DNA replication	IEA	AHRD
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEA	AHRD
BP	GO:0006281	DNA repair	IEA	AHRD
BP	GO:0006310	DNA recombination	IEA	AHRD
BP	GO:0006351	DNA-templated transcription	IEA	AHRD
BP	GO:0006353	DNA-templated transcription termination	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0006417	regulation of translation	IEA	AHRD
BP	GO:0006508	proteolysis	IEA	AHRD
BP	GO:0006575	cellular modified amino acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006760	folic acid-containing compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	IEA	AHRD
BP	GO:0007155	cell adhesion	IEA	AHRD
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007166	cell surface receptor signaling pathway	None	Extended
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	None	Extended
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	None	Extended
BP	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway	None	Extended
BP	GO:0007179	transforming growth factor beta receptor signaling pathway	IEA	AHRD
BP	GO:0007409	axonogenesis	IEA	AHRD
MF	GO:0008083	growth factor activity	IEA	AHRD
MF	GO:0008092	cytoskeletal protein binding	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	IEA	AHRD
MF	GO:0008168	methyltransferase activity	IEA	AHRD
MF	GO:0008186	ATP-dependent activity, acting on RNA	None	Extended
BP	GO:0008202	steroid metabolic process	IEA	AHRD
MF	GO:0008233	peptidase activity	IEA	AHRD
MF	GO:0008236	serine-type peptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
BP	GO:0008284	positive regulation of cell population proliferation	IEA	AHRD
BP	GO:0008285	negative regulation of cell population proliferation	None	Extended
BP	GO:0008543	fibroblast growth factor receptor signaling pathway	IEA	AHRD
MF	GO:0008745	N-acetylmuramoyl-L-alanine amidase activity	IEA	AHRD
MF	GO:0008821	crossover junction endodeoxyribonuclease activity	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009123	nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009124	nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009129	pyrimidine nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009130	pyrimidine nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009157	deoxyribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009162	deoxyribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	IEA	AHRD
BP	GO:0009176	pyrimidine deoxyribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009177	pyrimidine deoxyribonucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009219	pyrimidine deoxyribonucleotide metabolic process	None	Extended
BP	GO:0009221	pyrimidine deoxyribonucleotide biosynthetic process	None	Extended
BP	GO:0009253	peptidoglycan catabolic process	IEA	AHRD
BP	GO:0009262	deoxyribonucleotide metabolic process	None	Extended
BP	GO:0009263	deoxyribonucleotide biosynthetic process	None	Extended
BP	GO:0009265	2'-deoxyribonucleotide biosynthetic process	None	Extended
BP	GO:0009394	2'-deoxyribonucleotide metabolic process	None	Extended
BP	GO:0009396	folic acid-containing compound biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	AHRD
BP	GO:0009734	auxin-activated signaling pathway	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009887	animal organ morphogenesis	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010562	positive regulation of phosphorus metabolic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010628	positive regulation of gene expression	IEA	AHRD
CC	GO:0016020	membrane	IEA	AHRD
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016032	viral process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016301	kinase activity	IEA	AHRD
BP	GO:0016310	phosphorylation	IEA	AHRD
BP	GO:0016485	protein processing	IEA	AHRD
MF	GO:0016491	oxidoreductase activity	IEA	AHRD
MF	GO:0016740	transferase activity	IEA	AHRD
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
MF	GO:0016746	acyltransferase activity	IEA	AHRD
MF	GO:0016757	glycosyltransferase activity	IEA	AHRD
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	IEA	AHRD
MF	GO:0016787	hydrolase activity	IEA	AHRD
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEA	AHRD
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	None	Extended
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	None	Extended
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	None	Extended
MF	GO:0016889	endodeoxyribonuclease activity, producing 3'-phosphomonoesters	None	Extended
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017171	serine hydrolase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0019013	viral nucleocapsid	IEA	AHRD
CC	GO:0019028	viral capsid	IEA	AHRD
CC	GO:0019030	icosahedral viral capsid	None	Extended
BP	GO:0019048	modulation by virus of host process	None	Extended
BP	GO:0019049	mitigation of host antiviral defense response	None	Extended
BP	GO:0019054	modulation by virus of host cellular process	None	Extended
BP	GO:0019069	viral capsid assembly	IEA	AHRD
BP	GO:0019072	viral genome packaging	None	Extended
BP	GO:0019073	viral DNA genome packaging	IEA	AHRD
BP	GO:0019076	viral release from host cell	IEA	AHRD
BP	GO:0019079	viral genome replication	None	Extended
BP	GO:0019083	viral transcription	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019238	cyclohydrolase activity	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019692	deoxyribose phosphate metabolic process	None	Extended
BP	GO:0019835	cytolysis	IEA	AHRD
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030030	cell projection organization	None	Extended
BP	GO:0030154	cell differentiation	IEA	AHRD
BP	GO:0030198	extracellular matrix organization	IEA	AHRD
BP	GO:0030203	glycosaminoglycan metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0030334	regulation of cell migration	IEA	AHRD
CC	GO:0030430	host cell cytoplasm	IEA	AHRD
MF	GO:0030545	signaling receptor regulator activity	None	Extended
MF	GO:0030546	signaling receptor activator activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0030682	mitigation of host defenses by symbiont	None	Extended
BP	GO:0030908	protein splicing	IEA	AHRD
CC	GO:0031012	extracellular matrix	IEA	AHRD
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	None	Extended
BP	GO:0031554	regulation of termination of DNA-templated transcription	None	Extended
BP	GO:0031564	transcription antitermination	IEA	AHRD
BP	GO:0032259	methylation	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032504	multicellular organism reproduction	IEA	AHRD
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0032989	cellular component morphogenesis	None	Extended
BP	GO:0032990	cell part morphogenesis	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033644	host cell membrane	IEA	AHRD
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0033655	host cell cytoplasm part	None	Extended
MF	GO:0034061	DNA polymerase activity	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
BP	GO:0034248	regulation of cellular amide metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0035206	regulation of hemocyte proliferation	None	Extended
BP	GO:0035207	negative regulation of hemocyte proliferation	IEA	AHRD
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
BP	GO:0035821	modulation of process of another organism	None	Extended
BP	GO:0035891	exit from host cell	None	Extended
BP	GO:0035998	7,8-dihydroneopterin 3'-triphosphate biosynthetic process	IEA	AHRD
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0039503	suppression by virus of host innate immune response	IEA	AHRD
BP	GO:0039504	suppression by virus of host adaptive immune response	IEA	AHRD
BP	GO:0039537	suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway	None	Extended
BP	GO:0039548	suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity	IEA	AHRD
BP	GO:0039588	suppression by virus of host antigen processing and presentation	None	Extended
CC	GO:0039620	T=7 icosahedral viral capsid	IEA	AHRD
BP	GO:0039648	modulation by virus of host protein ubiquitination	IEA	AHRD
BP	GO:0039678	viral genome ejection through host cell envelope	None	Extended
BP	GO:0039686	bidirectional double-stranded viral DNA replication	IEA	AHRD
BP	GO:0039693	viral DNA genome replication	IEA	AHRD
BP	GO:0040012	regulation of locomotion	None	Extended
CC	GO:0042025	host cell nucleus	IEA	AHRD
MF	GO:0042083	5,10-methylenetetrahydrofolate-dependent methyltransferase activity	None	Extended
BP	GO:0042127	regulation of cell population proliferation	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0042327	positive regulation of phosphorylation	None	Extended
BP	GO:0042398	cellular modified amino acid biosynthetic process	None	Extended
BP	GO:0042558	pteridine-containing compound metabolic process	None	Extended
BP	GO:0042559	pteridine-containing compound biosynthetic process	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
MF	GO:0042802	identical protein binding	IEA	AHRD
BP	GO:0043062	extracellular structure organization	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
BP	GO:0044000	movement in host	None	Extended
BP	GO:0044003	modulation by symbiont of host process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044068	modulation by symbiont of host cellular process	None	Extended
CC	GO:0044172	host cell endoplasmic reticulum-Golgi intermediate compartment	IEA	AHRD
CC	GO:0044174	host cell endosome	IEA	AHRD
CC	GO:0044177	host cell Golgi apparatus	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044409	entry into host	None	Extended
BP	GO:0044414	suppression of host defenses by symbiont	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
CC	GO:0044423	virion component	None	Extended
BP	GO:0044501	modulation of signal transduction in another organism	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045937	positive regulation of phosphate metabolic process	None	Extended
BP	GO:0046073	dTMP metabolic process	None	Extended
BP	GO:0046385	deoxyribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046653	tetrahydrofolate metabolic process	None	Extended
BP	GO:0046654	tetrahydrofolate biosynthetic process	IEA	AHRD
BP	GO:0046718	viral entry into host cell	IEA	AHRD
CC	GO:0046729	viral procapsid	IEA	AHRD
BP	GO:0046776	suppression by virus of host antigen processing and presentation of peptide antigen via MHC class I	IEA	AHRD
BP	GO:0046794	transport of virus	None	Extended
BP	GO:0046797	viral procapsid maturation	IEA	AHRD
CC	GO:0046806	viral scaffold	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048018	receptor ligand activity	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048812	neuron projection morphogenesis	None	Extended
BP	GO:0048858	cell projection morphogenesis	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	AHRD
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0050797	thymidylate synthase (FAD) activity	IEA	AHRD
MF	GO:0050839	cell adhesion molecule binding	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051066	dihydrobiopterin metabolic process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	IEA	AHRD
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEA	AHRD
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0051701	biological process involved in interaction with host	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0052027	modulation by symbiont of host signal transduction pathway	None	Extended
BP	GO:0052029	suppression by symbiont of host signal transduction pathway	None	Extended
BP	GO:0052031	modulation by symbiont of host defense response	None	Extended
BP	GO:0052167	modulation by symbiont of host innate immune response	None	Extended
BP	GO:0052170	suppression by symbiont of host innate immune response	None	Extended
BP	GO:0052173	response to defenses of other organism	None	Extended
BP	GO:0052200	response to host defenses	None	Extended
BP	GO:0052553	modulation by symbiont of host immune response	None	Extended
BP	GO:0052562	suppression by symbiont of host immune response	None	Extended
BP	GO:0052572	response to host immune response	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
MF	GO:0061783	peptidoglycan muralytic activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0070851	growth factor receptor binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0071897	DNA biosynthetic process	IEA	AHRD
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
BP	GO:0075109	modulation by symbiont of host receptor-mediated signal transduction	None	Extended
BP	GO:0075111	suppression by symbiont of host receptor-mediated signal transduction	None	Extended
BP	GO:0075136	response to host	None	Extended
BP	GO:0075528	modulation by virus of host immune response	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEA	AHRD
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0097659	nucleic acid-templated transcription	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
BP	GO:0098003	viral tail assembly	IEA	AHRD
CC	GO:0098015	virus tail	IEA	AHRD
CC	GO:0098025	virus tail, baseplate	IEA	AHRD
BP	GO:0098542	defense response to other organism	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
BP	GO:0099002	viral genome ejection through host cell envelope, short tail mechanism	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120039	plasma membrane bounded cell projection morphogenesis	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000145	regulation of cell motility	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000427	plastid-encoded plastid RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004325	ferrochelatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004828	serine-tRNA ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005739	mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006434	seryl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006783	heme biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008187	poly-pyrimidine tract binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008266	poly(U) RNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0009295	nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009631	cold acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009658	chloroplast organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0009941	chloroplast envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0010319	stromule	IEP	Predict GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016553	base conversion or substitution editing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predict GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031967	organelle envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031975	envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042168	heme metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042644	chloroplast nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0042646	plastid nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043489	RNA stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0048481	plant ovule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051341	regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051353	positive regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0070127	tRNA aminoacylation for mitochondrial protein translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070158	mitochondrial seryl-tRNA aminoacylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0097056	selenocysteinyl-tRNA(Sec) biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1901259	chloroplast rRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:1901668	regulation of superoxide dismutase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901671	positive regulation of superoxide dismutase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902369	negative regulation of RNA catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006027	NusB_RsmB_TIM44	187	275
IPR035926	NusB-like_sf	88	277

External Links

No external refs found!

SOLTUB.AGRIA.G00000001696

Expression Profile

Co-expression Networks

Functional Annotation