Description : DNA ligase
Gene families : OG_02_0009065 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000016778 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_6 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001732 | formation of cytoplasmic translation initiation complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001786 | phosphatidylserine binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002831 | regulation of response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003779 | actin binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003924 | GTPase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005507 | copper ion binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005788 | endoplasmic reticulum lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006446 | regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008289 | lipid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009631 | cold acclimation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009694 | jasmonic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009850 | auxin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010112 | regulation of systemic acquired resistance | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010178 | IAA-amino acid conjugate hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010179 | IAA-Ala conjugate hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010210 | IAA-Phe conjugate hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010211 | IAA-Leu conjugate hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015629 | actin cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016151 | nickel cation binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019218 | regulation of steroid metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031210 | phosphatidylcholine binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031347 | regulation of defense response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032101 | regulation of response to external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032365 | intracellular lipid transport | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033290 | eukaryotic 48S preinitiation complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035621 | ER to Golgi ceramide transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035627 | ceramide transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042255 | ribosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042256 | mature ribosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042886 | amide transport | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044232 | organelle membrane contact site | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050821 | protein stabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050829 | defense response to Gram-negative bacterium | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050997 | quaternary ammonium group binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070993 | translation preinitiation complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071561 | nucleus-vacuole junction | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0072341 | modified amino acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090559 | regulation of membrane permeability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900426 | positive regulation of defense response to bacterium | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990206 | jasmonyl-Ile conjugate hydrolase activity | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |