SOLTUB.AGRIA.G00000001763

Description : Superoxide dismutase

Gene families : OG_02_0007827 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001763
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_245

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004784	superoxide dismutase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006801	superoxide metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0007623	circadian rhythm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009295	nucleoid	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	IEA	AHRD
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009579	thylakoid	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	IEA	AHRD
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010193	response to ozone	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
MF	GO:0016209	antioxidant activity	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016721	oxidoreductase activity, acting on superoxide radicals as acceptor	None	Extended
BP	GO:0019430	removal of superoxide radicals	IEA	AHRD
MF	GO:0019904	protein domain specific binding	IEA	AHRD
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0042644	chloroplast nucleoid	IEA	AHRD
CC	GO:0042646	plastid nucleoid	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
BP	GO:0046688	response to copper ion	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended
BP	GO:0098754	detoxification	None	Extended
BP	GO:0098869	cellular oxidant detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1990748	cellular detoxification	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000427	plastid-encoded plastid RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000428	DNA-directed RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002128	tRNA nucleoside ribose methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002130	wobble position ribose methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002131	wobble position cytosine ribose methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002132	wobble position uridine ribose methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004620	phospholipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004629	phospholipase C activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006351	DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008175	tRNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009503	thylakoid light-harvesting complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009508	plastid chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0009521	photosystem	IEP	Predict GO terms from Neighborhoods
CC	GO:0009523	photosystem II	IEP	Predict GO terms from Neighborhoods
BP	GO:0009704	de-etiolation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0016168	chlorophyll binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0016298	lipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016300	tRNA (uracil) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016427	tRNA (cytosine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018298	obsolete protein-chromophore linkage	IEP	Predict GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0030076	light-harvesting complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0030488	tRNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030656	regulation of vitamin metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030880	RNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0042793	plastid transcription	IEP	Predict GO terms from Neighborhoods
MF	GO:0043495	protein-membrane adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045828	positive regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045834	positive regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046136	positive regulation of vitamin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046889	positive regulation of lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048564	photosystem I assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0050518	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052665	tRNA (uracil-2'-O-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052666	tRNA (cytosine-2'-O-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0060090	molecular adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0062013	positive regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0062105	RNA 2'-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070567	cytidylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090056	regulation of chlorophyll metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0106050	tRNA 2'-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901403	positive regulation of tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901465	positive regulation of tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902326	positive regulation of chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902932	positive regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904963	regulation of phytol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904964	positive regulation of phytol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904965	regulation of vitamin E biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1904966	positive regulation of vitamin E biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR019831	Mn/Fe_SOD_N	45	129
IPR019832	Mn/Fe_SOD_C	138	251
IPR036314	SOD_C_sf	132	258
IPR036324	Mn/Fe_SOD_N_sf	41	131

External Links

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SOLTUB.AGRIA.G00000001763

Expression Profile

Co-expression Networks

Functional Annotation