Coexpression cluster: Cluster_245 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006720 isoprenoid metabolic process 13.85% (18/130) 2.28 0.0 4.8e-05
GO:0008299 isoprenoid biosynthetic process 13.08% (17/130) 2.44 0.0 5.1e-05
GO:0044238 primary metabolic process 53.85% (70/130) 0.76 0.0 0.000166
GO:0004497 monooxygenase activity 10.77% (14/130) 2.45 0.0 0.000224
GO:0008152 metabolic process 61.54% (80/130) 0.63 0.0 0.000232
GO:0008610 lipid biosynthetic process 16.15% (21/130) 1.79 1e-06 0.000242
GO:0016114 terpenoid biosynthetic process 9.23% (12/130) 2.6 1e-06 0.000244
GO:0071704 organic substance metabolic process 58.46% (76/130) 0.66 1e-06 0.000257
GO:0008150 biological_process 81.54% (106/130) 0.41 1e-06 0.000268
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen 9.23% (12/130) 2.5 2e-06 0.000453
GO:0003824 catalytic activity 53.08% (69/130) 0.69 2e-06 0.000477
GO:0006721 terpenoid metabolic process 10.0% (13/130) 2.3 3e-06 0.000656
GO:0016105 triterpenoid catabolic process 3.08% (4/130) 5.14 5e-06 0.000715
GO:0019741 pentacyclic triterpenoid catabolic process 3.08% (4/130) 5.14 5e-06 0.000715
GO:1902381 11-oxo-beta-amyrin metabolic process 3.08% (4/130) 5.14 5e-06 0.000715
GO:1902382 11-oxo-beta-amyrin catabolic process 3.08% (4/130) 5.14 5e-06 0.000715
GO:1902384 glycyrrhetinate metabolic process 3.08% (4/130) 5.14 5e-06 0.000715
GO:1902386 glycyrrhetinate biosynthetic process 3.08% (4/130) 5.14 5e-06 0.000715
GO:0050595 7-deoxyloganin 7-hydroxylase activity 3.08% (4/130) 5.1 6e-06 0.000732
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 10.77% (14/130) 2.09 6e-06 0.000762
GO:0050616 secologanin synthase activity 3.08% (4/130) 5.06 6e-06 0.000785
GO:0044255 cellular lipid metabolic process 17.69% (23/130) 1.52 4e-06 0.000875
GO:0016020 membrane 46.92% (61/130) 0.73 4e-06 0.00094
GO:0006629 lipid metabolic process 19.23% (25/130) 1.35 1.2e-05 0.001432
GO:0043231 intracellular membrane-bounded organelle 53.08% (69/130) 0.6 1.6e-05 0.001859
GO:0019745 pentacyclic triterpenoid biosynthetic process 3.08% (4/130) 4.68 1.9e-05 0.002045
GO:0005783 endoplasmic reticulum 13.85% (18/130) 1.63 2e-05 0.00208
GO:0043227 membrane-bounded organelle 53.08% (69/130) 0.59 2.5e-05 0.002512
GO:0009987 cellular process 70.0% (91/130) 0.42 2.7e-05 0.002652
GO:0006807 nitrogen compound metabolic process 44.62% (58/130) 0.68 3.5e-05 0.00293
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 3.08% (4/130) 4.48 3.2e-05 0.002986
GO:0044249 cellular biosynthetic process 27.69% (36/130) 0.98 3.4e-05 0.003011
GO:0008395 steroid hydroxylase activity 3.08% (4/130) 4.45 3.5e-05 0.003018
GO:0043229 intracellular organelle 57.69% (75/130) 0.53 3.2e-05 0.003025
GO:0071214 cellular response to abiotic stimulus 10.0% (13/130) 1.92 4.2e-05 0.003138
GO:0104004 cellular response to environmental stimulus 10.0% (13/130) 1.92 4.2e-05 0.003138
GO:0043226 organelle 57.69% (75/130) 0.52 4e-05 0.003251
GO:0042181 ketone biosynthetic process 3.85% (5/130) 3.72 4.1e-05 0.003276
GO:1901576 organic substance biosynthetic process 28.46% (37/130) 0.94 5.1e-05 0.003696
GO:0044237 cellular metabolic process 50.77% (66/130) 0.58 5.3e-05 0.003702
GO:0016104 triterpenoid biosynthetic process 3.08% (4/130) 4.3 5.3e-05 0.003751
GO:0003674 molecular_function 76.15% (99/130) 0.35 6e-05 0.003961
GO:1901564 organonitrogen compound metabolic process 36.92% (48/130) 0.76 5.9e-05 0.003984
GO:0042182 ketone catabolic process 3.08% (4/130) 4.23 6.4e-05 0.00412
GO:0009058 biosynthetic process 29.23% (38/130) 0.9 6.9e-05 0.004371
GO:0010268 brassinosteroid homeostasis 3.08% (4/130) 4.17 7.6e-05 0.004718
GO:0019742 pentacyclic triterpenoid metabolic process 3.08% (4/130) 4.02 0.000112 0.006808
GO:0016115 terpenoid catabolic process 3.85% (5/130) 3.33 0.000152 0.008816
GO:0044242 cellular lipid catabolic process 5.38% (7/130) 2.63 0.00015 0.008905
GO:0017000 antibiotic biosynthetic process 1.54% (2/130) 6.65 0.000163 0.009306
GO:0008300 isoprenoid catabolic process 3.85% (5/130) 3.25 0.000193 0.010583
GO:0009820 alkaloid metabolic process 6.92% (9/130) 2.17 0.000189 0.010588
GO:0002695 negative regulation of leukocyte activation 1.54% (2/130) 6.42 0.000228 0.012038
GO:0050866 negative regulation of cell activation 1.54% (2/130) 6.42 0.000228 0.012038
GO:1901361 organic cyclic compound catabolic process 7.69% (10/130) 1.98 0.000249 0.012915
GO:0046662 regulation of oviposition 2.31% (3/130) 4.61 0.000257 0.01309
GO:0009581 detection of external stimulus 3.85% (5/130) 3.13 0.000286 0.013813
GO:0009582 detection of abiotic stimulus 3.85% (5/130) 3.13 0.000286 0.013813
GO:0042180 cellular ketone metabolic process 3.85% (5/130) 3.13 0.000286 0.013813
GO:0006722 triterpenoid metabolic process 3.08% (4/130) 3.63 0.000319 0.014891
GO:0016135 saponin biosynthetic process 3.85% (5/130) 3.09 0.000318 0.015098
GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen 4.62% (6/130) 2.69 0.000357 0.016402
GO:0005575 cellular_component 75.38% (98/130) 0.3 0.000384 0.017394
GO:0031090 organelle membrane 23.85% (31/130) 0.89 0.000422 0.018491
GO:0071215 cellular response to abscisic acid stimulus 3.85% (5/130) 3.01 0.000419 0.018681
GO:0005773 vacuole 11.54% (15/130) 1.4 0.000574 0.024808
GO:0018193 peptidyl-amino acid modification 8.46% (11/130) 1.7 0.000607 0.02508
GO:1901575 organic substance catabolic process 16.15% (21/130) 1.12 0.000616 0.02509
GO:0010239 chloroplast mRNA processing 1.54% (2/130) 5.77 0.000592 0.025189
GO:0044248 cellular catabolic process 15.38% (20/130) 1.16 0.000603 0.025263
GO:0051239 regulation of multicellular organismal process 16.92% (22/130) 1.07 0.000673 0.027015
GO:0017196 N-terminal peptidyl-methionine acetylation 1.54% (2/130) 5.65 0.000709 0.028066
GO:0016740 transferase activity 26.15% (34/130) 0.79 0.000726 0.028371
GO:0110165 cellular anatomical entity 73.85% (96/130) 0.3 0.000747 0.028791
GO:0002239 response to oomycetes 5.38% (7/130) 2.23 0.000782 0.02932
GO:0016134 saponin metabolic process 3.85% (5/130) 2.81 0.000772 0.029337
GO:0051604 protein maturation 3.85% (5/130) 2.79 0.000838 0.031045
GO:1901360 organic cyclic compound metabolic process 27.69% (36/130) 0.75 0.00091 0.032852
GO:0009583 detection of light stimulus 3.08% (4/130) 3.23 0.000906 0.033122
GO:0009628 response to abiotic stimulus 30.77% (40/130) 0.68 0.001014 0.036143
GO:0016491 oxidoreductase activity 14.62% (19/130) 1.13 0.001068 0.037591
GO:0016131 brassinosteroid metabolic process 3.08% (4/130) 3.16 0.001104 0.03839
GO:0106371 fluorescent chlorophyll catabolite monooxygenase (deformylase) activity 1.54% (2/130) 5.33 0.00112 0.038481
GO:0005634 nucleus 24.62% (32/130) 0.79 0.001168 0.038719
GO:0018105 peptidyl-serine phosphorylation 3.85% (5/130) 2.68 0.001149 0.039002
GO:0016042 lipid catabolic process 5.38% (7/130) 2.13 0.001165 0.039069
GO:0097306 cellular response to alcohol 3.85% (5/130) 2.67 0.001216 0.03984
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups 6.15% (8/130) 1.93 0.001268 0.041073
GO:0009939 positive regulation of gibberellic acid mediated signaling pathway 2.31% (3/130) 3.82 0.001291 0.041367
GO:0016138 glycoside biosynthetic process 3.85% (5/130) 2.64 0.001333 0.042228
GO:0004722 protein serine/threonine phosphatase activity 3.08% (4/130) 3.07 0.001365 0.042314
GO:0035834 indole alkaloid metabolic process 3.85% (5/130) 2.62 0.001382 0.042374
GO:0048509 regulation of meristem development 4.62% (6/130) 2.31 0.001398 0.0424
GO:0018209 peptidyl-serine modification 3.85% (5/130) 2.63 0.001357 0.042529
GO:0010029 regulation of seed germination 5.38% (7/130) 2.08 0.001454 0.043179
GO:0047084 methyltetrahydroprotoberberine 14-monooxygenase activity 1.54% (2/130) 5.14 0.001445 0.043357
GO:0004713 protein tyrosine kinase activity 3.85% (5/130) 2.58 0.001592 0.046806
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_103 0.018 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_122 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_156 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_177 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_210 0.02 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_216 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_223 0.025 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_224 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_242 0.01 Orthogroups with 8 Potato genotypes Compare
Sequences (130) (download table)

InterPro Domains

GO Terms

Family Terms