SOLTUB.AGRIA.G00000017152


Description : E3 ubiquitin-protein ligase rha2a


Gene families : OG_02_0005842 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000017152
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_55


Type GO Term Name Evidence Source
BP GO:0000209 protein polyubiquitination IEA AHRD
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
BP GO:0001525 angiogenesis IEA AHRD
BP GO:0001889 liver development IEA AHRD
MF GO:0005109 frizzled binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005764 lysosome IEA AHRD
CC GO:0005768 endosome IEA AHRD
CC GO:0005774 vacuolar membrane IEA AHRD
CC GO:0005783 endoplasmic reticulum IEA AHRD
CC GO:0005887 integral component of plasma membrane IEA AHRD
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:0006513 protein monoubiquitination IEA AHRD
BP GO:0006974 cellular response to DNA damage stimulus IEA AHRD
BP GO:0008045 motor neuron axon guidance IEA AHRD
BP GO:0009651 response to salt stress IEA AHRD
BP GO:0009687 abscisic acid metabolic process IEA AHRD
BP GO:0009739 response to gibberellin IEA AHRD
BP GO:0009741 response to brassinosteroid IEA AHRD
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010259 multicellular organism aging IEA AHRD
BP GO:0030513 positive regulation of BMP signaling pathway IEA AHRD
MF GO:0032184 SUMO polymer binding IEA AHRD
CC GO:0032991 protein-containing complex IEA AHRD
BP GO:0035136 forelimb morphogenesis IEA AHRD
BP GO:0038018 Wnt receptor catabolic process IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0047484 regulation of response to osmotic stress IEA AHRD
BP GO:0048903 anterior lateral line neuromast hair cell differentiation IEA AHRD
BP GO:0048916 posterior lateral line development IEA AHRD
BP GO:0060384 innervation IEA AHRD
BP GO:0061061 muscle structure development IEA AHRD
MF GO:0061630 ubiquitin protein ligase activity IEA AHRD
BP GO:0072089 stem cell proliferation IEA AHRD
BP GO:0080167 response to karrikin IEA AHRD
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEA AHRD
BP GO:1905421 regulation of plant organ morphogenesis IEA AHRD
BP GO:2000051 negative regulation of non-canonical Wnt signaling pathway IEA AHRD
BP GO:2000095 regulation of Wnt signaling pathway, planar cell polarity pathway IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predict GO terms from Neighborhoods
BP GO:0001101 response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0002028 regulation of sodium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0002679 respiratory burst involved in defense response IEP Predict GO terms from Neighborhoods
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004165 delta(3)-delta(2)-enoyl-CoA isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004300 enoyl-CoA hydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Predict GO terms from Neighborhoods
CC GO:0005769 early endosome IEP Predict GO terms from Neighborhoods
CC GO:0005798 Golgi-associated vesicle IEP Predict GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006928 obsolete movement of cell or subcellular component IEP Predict GO terms from Neighborhoods
BP GO:0006942 regulation of striated muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0007154 cell communication IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0008300 isoprenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008692 3-hydroxybutyryl-CoA epimerase activity IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009395 phospholipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009414 response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:0009415 response to water IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009717 isoflavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009991 response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010035 response to inorganic substance IEP Predict GO terms from Neighborhoods
MF GO:0010333 terpene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0010334 sesquiterpene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0010765 positive regulation of sodium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0010966 regulation of phosphate transport IEP Predict GO terms from Neighborhoods
BP GO:0015692 lead ion transport IEP Predict GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016101 diterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016102 diterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016106 sesquiterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016114 terpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016115 terpenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016508 long-chain-enoyl-CoA hydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016710 trans-cinnamate 4-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predict GO terms from Neighborhoods
MF GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Predict GO terms from Neighborhoods
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Predict GO terms from Neighborhoods
MF GO:0018675 (S)-limonene 6-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0018812 3-hydroxyacyl-CoA dehydratase activity IEP Predict GO terms from Neighborhoods
BP GO:0018871 1-aminocyclopropane-1-carboxylate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0018973 trinitrotoluene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0018974 2,4,6-trinitrotoluene metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019113 limonene monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0019326 nitrotoluene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019748 secondary metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Predict GO terms from Neighborhoods
CC GO:0030017 sarcomere IEP Predict GO terms from Neighborhoods
BP GO:0030100 regulation of endocytosis IEP Predict GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0031668 cellular response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0033591 response to L-ascorbic acid IEP Predict GO terms from Neighborhoods
MF GO:0033987 2-hydroxyisoflavanone dehydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0034003 vetispiradiene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0042214 terpene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0042383 sarcolemma IEP Predict GO terms from Neighborhoods
BP GO:0042551 neuron maturation IEP Predict GO terms from Neighborhoods
BP GO:0042631 cellular response to water deprivation IEP Predict GO terms from Neighborhoods
BP GO:0043562 cellular response to nitrogen levels IEP Predict GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044304 main axon IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045338 farnesyl diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045339 farnesyl diphosphate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046246 terpene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046256 2,4,6-trinitrotoluene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046260 trinitrotoluene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046263 nitrotoluene catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046287 isoflavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046434 organophosphate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047517 1,4-beta-D-xylan synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0051049 regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051761 sesquiterpene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051762 sesquiterpene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0055117 regulation of cardiac muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0060627 regulation of vesicle-mediated transport IEP Predict GO terms from Neighborhoods
MF GO:0062150 amorpha-4,11-diene 12-monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0062197 cellular response to chemical stress IEP Predict GO terms from Neighborhoods
MF GO:0070696 transmembrane receptor protein serine/threonine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071214 cellular response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071229 cellular response to acid chemical IEP Predict GO terms from Neighborhoods
BP GO:0071462 cellular response to water stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071470 cellular response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0071496 cellular response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072490 toluene-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072491 toluene-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0086019 cell-cell signaling involved in cardiac conduction IEP Predict GO terms from Neighborhoods
BP GO:0086065 cell communication involved in cardiac conduction IEP Predict GO terms from Neighborhoods
BP GO:0086070 SA node cell to atrial cardiac muscle cell communication IEP Predict GO terms from Neighborhoods
BP GO:0098900 regulation of action potential IEP Predict GO terms from Neighborhoods
BP GO:0098901 regulation of cardiac muscle cell action potential IEP Predict GO terms from Neighborhoods
MF GO:0102170 5-epi-aristolochene-1,3-dihydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0102698 5-epi-aristolochene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0104004 cellular response to environmental stimulus IEP Predict GO terms from Neighborhoods
MF GO:0106223 germacrene A hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0120251 hydrocarbon biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0120252 hydrocarbon metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901000 regulation of response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901701 cellular response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1903426 regulation of reactive oxygen species biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001841 Znf_RING 98 141
No external refs found!