SOLTUB.AGRIA.G00000017632

Description : Protein iq-domain 31

Gene families : OG_02_0014766 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000017632
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_261

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005874	microtubule	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009738	abscisic acid-activated signaling pathway	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010037	response to carbon dioxide	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010089	xylem development	IEA	AHRD
BP	GO:0010091	trichome branching	IEA	AHRD
BP	GO:0010119	regulation of stomatal movement	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016604	nuclear body	None	Extended
CC	GO:0016607	nuclear speck	IEA	AHRD
BP	GO:0019722	calcium-mediated signaling	IEA	AHRD
BP	GO:0019932	second-messenger-mediated signaling	None	Extended
CC	GO:0031967	organelle envelope	IEA	AHRD
CC	GO:0031975	envelope	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	IEA	AHRD
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051592	response to calcium ion	IEA	AHRD
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055074	calcium ion homeostasis	IEA	AHRD
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071244	cellular response to carbon dioxide	IEA	AHRD
BP	GO:0072507	divalent inorganic cation homeostasis	None	Extended
BP	GO:0090333	regulation of stomatal closure	IEA	AHRD
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0099081	supramolecular polymer	None	Extended
CC	GO:0099512	supramolecular fiber	None	Extended
CC	GO:0099513	polymeric cytoskeletal fiber	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1903338	regulation of cell wall organization or biogenesis	None	Extended
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003730	mRNA 3'-UTR binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005847	mRNA cleavage and polyadenylation specificity factor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005849	mRNA cleavage factor complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006378	mRNA polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006379	mRNA cleavage	IEP	Predict GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007276	gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007281	germ cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007292	female gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009838	abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0010015	root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010073	meristem maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010101	post-embryonic root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010102	lateral root morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0016073	snRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016180	snRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0017069	snRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0017070	U6 snRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0017148	negative regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031124	mRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0034249	negative regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034472	snRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034477	U6 snRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042277	peptide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043487	regulation of RNA stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0043488	regulation of mRNA stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0043631	RNA polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048316	seed development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048437	floral organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048477	oogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0050265	RNA uridylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050779	RNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060147	regulation of post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0060966	regulation of gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0061013	regulation of mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0061014	positive regulation of mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0061157	mRNA destabilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0070566	adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070569	uridylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0098787	mRNA cleavage involved in mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0098789	pre-mRNA cleavage required for polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903311	regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903313	positive regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990074	polyuridylation-dependent mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000023	regulation of lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000069	regulation of post-embryonic root development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000113	negative regulation of cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000280	regulation of root development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000048	IQ_motif_EF-hand-BS	106	124
IPR000048	IQ_motif_EF-hand-BS	129	145
IPR000048	IQ_motif_EF-hand-BS	156	170
IPR025064	DUF4005	444	534

External Links

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SOLTUB.AGRIA.G00000017632

Expression Profile

Co-expression Networks

Functional Annotation