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  5. SOLTUB.AGRIA.G00000017689

SOLTUB.AGRIA.G00000017689


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_02_0009134 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000017689
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_260


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0000018 regulation of DNA recombination IEP Predict GO terms from Neighborhoods
MF GO:0000049 tRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000062 fatty-acyl-CoA binding IEP Predict GO terms from Neighborhoods
BP GO:0000070 mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Predict GO terms from Neighborhoods
CC GO:0000228 nuclear chromosome IEP Predict GO terms from Neighborhoods
BP GO:0000281 mitotic cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000819 sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0001503 ossification IEP Predict GO terms from Neighborhoods
BP GO:0001578 microtubule bundle formation IEP Predict GO terms from Neighborhoods
BP GO:0001649 osteoblast differentiation IEP Predict GO terms from Neighborhoods
MF GO:0004491 methylmalonate-semialdehyde dehydrogenase (acylating) activity IEP Predict GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0005451 monovalent cation:proton antiporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
BP GO:0006022 aminoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006023 aminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006024 glycosaminoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006029 proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006097 glyoxylate cycle IEP Predict GO terms from Neighborhoods
BP GO:0006099 tricarboxylic acid cycle IEP Predict GO terms from Neighborhoods
BP GO:0006108 malate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006208 pyrimidine nucleobase catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006210 thymine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predict GO terms from Neighborhoods
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0006520 cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006573 valine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006574 valine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006623 protein targeting to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006749 glutathione metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006885 regulation of pH IEP Predict GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007059 chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007084 mitotic nuclear membrane reassembly IEP Predict GO terms from Neighborhoods
BP GO:0007140 male meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007626 locomotory behavior IEP Predict GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0008088 axo-dendritic transport IEP Predict GO terms from Neighborhoods
BP GO:0008089 anterograde axonal transport IEP Predict GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Predict GO terms from Neighborhoods
MF GO:0008460 dTDP-glucose 4,6-dehydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0008568 microtubule severing ATPase activity IEP Predict GO terms from Neighborhoods
BP GO:0008582 regulation of synaptic assembly at neuromuscular junction IEP Predict GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009083 branched-chain amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009100 glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009101 glycoprotein biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009112 nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009225 nucleotide-sugar metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009328 phenylalanine-tRNA ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0009514 glyoxysome IEP Predict GO terms from Neighborhoods
BP GO:0009960 endosperm development IEP Predict GO terms from Neighborhoods
BP GO:0010458 exit from mitosis IEP Predict GO terms from Neighborhoods
BP GO:0010569 regulation of double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0010970 transport along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0015012 heparan sulfate proteoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015298 solute:cation antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016615 malate dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016787 hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predict GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predict GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Predict GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predict GO terms from Neighborhoods
MF GO:0017005 3'-tyrosyl-DNA phosphodiesterase activity IEP Predict GO terms from Neighborhoods
MF GO:0018478 malonate-semialdehyde dehydrogenase (acetylating) activity IEP Predict GO terms from Neighborhoods
BP GO:0019305 dTDP-rhamnose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019482 beta-alanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019483 beta-alanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019484 beta-alanine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019859 thymine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019896 axonal transport of mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0030007 cellular potassium ion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0030060 L-malate dehydrogenase activity IEP Predict GO terms from Neighborhoods
BP GO:0030104 water homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030166 proteoglycan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Predict GO terms from Neighborhoods
BP GO:0030201 heparan sulfate proteoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030203 glycosaminoglycan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030204 chondroitin sulfate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030206 chondroitin sulfate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0030496 midbody IEP Predict GO terms from Neighborhoods
BP GO:0030516 regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
BP GO:0031114 regulation of microtubule depolymerization IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0031468 nuclear membrane reassembly IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0031998 regulation of fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
BP GO:0032465 regulation of cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0032467 positive regulation of cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0032506 cytokinetic process IEP Predict GO terms from Neighborhoods
CC GO:0032580 Golgi cisterna membrane IEP Predict GO terms from Neighborhoods
BP GO:0033319 UDP-D-xylose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033320 UDP-D-xylose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033687 osteoblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0034214 protein hexamerization IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034643 establishment of mitochondrion localization, microtubule-mediated IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0040011 locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042732 D-xylose metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043014 alpha-tubulin binding IEP Predict GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Predict GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044770 cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:0044772 mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:0045444 fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045491 xylan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045492 xylan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0046113 nucleobase catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046320 regulation of fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0046383 dTDP-rhamnose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046487 glyoxylate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0047497 mitochondrion transport along microtubule IEP Predict GO terms from Neighborhoods
MF GO:0048040 UDP-glucuronate decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0048487 beta-tubulin binding IEP Predict GO terms from Neighborhoods
MF GO:0050313 sulfur dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050770 regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050772 positive regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050807 regulation of synapse organization IEP Predict GO terms from Neighborhoods
BP GO:0050873 brown fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050994 regulation of lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051013 microtubule severing IEP Predict GO terms from Neighborhoods
MF GO:0051087 chaperone binding IEP Predict GO terms from Neighborhoods
BP GO:0051216 cartilage development IEP Predict GO terms from Neighborhoods
BP GO:0051228 mitotic spindle disassembly IEP Predict GO terms from Neighborhoods
BP GO:0051230 spindle disassembly IEP Predict GO terms from Neighborhoods
BP GO:0051259 protein complex oligomerization IEP Predict GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Predict GO terms from Neighborhoods
BP GO:0051290 protein heterotetramerization IEP Predict GO terms from Neighborhoods
BP GO:0051291 protein heterooligomerization IEP Predict GO terms from Neighborhoods
BP GO:0051646 mitochondrion localization IEP Predict GO terms from Neighborhoods
BP GO:0051654 establishment of mitochondrion localization IEP Predict GO terms from Neighborhoods
BP GO:0051781 positive regulation of cell division IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051963 regulation of synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0062091 Ycf2/FtsHi complex IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
MF GO:0070259 tyrosyl-DNA phosphodiesterase activity IEP Predict GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Predict GO terms from Neighborhoods
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0070813 hydrogen sulfide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071479 cellular response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0071709 membrane assembly IEP Predict GO terms from Neighborhoods
BP GO:0071763 nuclear membrane organization IEP Predict GO terms from Neighborhoods
CC GO:0071782 endoplasmic reticulum tubular network IEP Predict GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072384 organelle transport along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072666 establishment of protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0080093 regulation of photorespiration IEP Predict GO terms from Neighborhoods
BP GO:0090148 membrane fission IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
CC GO:0098793 presynapse IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
CC GO:0098827 endoplasmic reticulum subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0098930 axonal transport IEP Predict GO terms from Neighborhoods
BP GO:0099111 microtubule-based transport IEP Predict GO terms from Neighborhoods
BP GO:0101024 mitotic nuclear membrane organization IEP Predict GO terms from Neighborhoods
MF GO:0102662 malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity IEP Predict GO terms from Neighborhoods
MF GO:0120227 acyl-CoA binding IEP Predict GO terms from Neighborhoods
BP GO:0140013 meiotic nuclear division IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
MF GO:0140776 protein-containing complex destabilizing activity IEP Predict GO terms from Neighborhoods
BP GO:1900073 regulation of neuromuscular synaptic transmission IEP Predict GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:1901567 fatty acid derivative binding IEP Predict GO terms from Neighborhoods
MF GO:1901681 sulfur compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901879 regulation of protein depolymerization IEP Predict GO terms from Neighborhoods
BP GO:1901888 regulation of cell junction assembly IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903008 organelle disassembly IEP Predict GO terms from Neighborhoods
BP GO:1903510 mucopolysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904396 regulation of neuromuscular junction development IEP Predict GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:2000779 regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2001234 negative regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001242 regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001243 negative regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011990 TPR-like_helical_dom_sf 107 463
No external refs found!