SOLTUB.AGRIA.G00000017958


Description : ADP-ribosylation factor


Gene families : OG_02_0000239 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000017958
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_169

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000000490 No alias ADP-ribosylation factor 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001994 No alias Adp-ribosylation factor 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000490 No alias ADP-ribosylation factor 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001994 No alias Adp-ribosylation factor 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000000490 No alias ADP-ribosylation factor 0.03 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001994 No alias Adp-ribosylation factor 0.02 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA AHRD
MF GO:0000287 magnesium ion binding IEA AHRD
BP GO:0002090 regulation of receptor internalization IEA AHRD
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0003924 GTPase activity IEA AHRD
MF GO:0005525 GTP binding IEA AHRD
CC GO:0005769 early endosome IEA AHRD
CC GO:0005770 late endosome IEA AHRD
CC GO:0005773 vacuole IEA AHRD
CC GO:0005778 peroxisomal membrane IEA AHRD
CC GO:0005802 trans-Golgi network IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006471 protein ADP-ribosylation IEA AHRD
BP GO:0006878 cellular copper ion homeostasis IEA AHRD
BP GO:0006886 intracellular protein transport IEA AHRD
BP GO:0009734 auxin-activated signaling pathway IEA AHRD
CC GO:0014069 postsynaptic density IEA AHRD
MF GO:0019003 GDP binding IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
CC GO:0030017 sarcomere IEA AHRD
CC GO:0030137 COPI-coated vesicle IEA AHRD
BP GO:0031001 response to brefeldin A IEA AHRD
CC GO:0031252 cell leading edge IEA AHRD
CC GO:0032991 protein-containing complex IEA AHRD
BP GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation IEA AHRD
BP GO:0034379 very-low-density lipoprotein particle assembly IEA AHRD
CC GO:0043005 neuron projection IEA AHRD
BP GO:0045807 positive regulation of endocytosis IEA AHRD
BP GO:0045956 positive regulation of calcium ion-dependent exocytosis IEA AHRD
BP GO:0046686 response to cadmium ion IEA AHRD
CC GO:0048471 perinuclear region of cytoplasm IEA AHRD
BP GO:0050714 positive regulation of protein secretion IEA AHRD
BP GO:0050790 regulation of catalytic activity IEA AHRD
BP GO:0055108 Golgi to transport vesicle transport IEA AHRD
BP GO:0060292 long-term synaptic depression IEA AHRD
BP GO:0060999 positive regulation of dendritic spine development IEA AHRD
BP GO:0070142 synaptic vesicle budding IEA AHRD
BP GO:0090354 regulation of auxin metabolic process IEA AHRD
BP GO:0097061 dendritic spine organization IEA AHRD
BP GO:0097212 lysosomal membrane organization IEA AHRD
BP GO:0098586 cellular response to virus IEA AHRD
BP GO:0098876 vesicle-mediated transport to the plasma membrane IEA AHRD
BP GO:0098974 postsynaptic actin cytoskeleton organization IEA AHRD
CC GO:0098978 glutamatergic synapse IEA AHRD
BP GO:1902307 positive regulation of sodium ion transmembrane transport IEA AHRD
BP GO:1902824 positive regulation of late endosome to lysosome transport IEA AHRD
BP GO:1902953 positive regulation of ER to Golgi vesicle-mediated transport IEA AHRD
BP GO:1903725 regulation of phospholipid metabolic process IEA AHRD
BP GO:1990386 mitotic cleavage furrow ingression IEA AHRD
MF GO:1990583 phospholipase D activator activity IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predict GO terms from Neighborhoods
BP GO:0000266 mitochondrial fission IEP Predict GO terms from Neighborhoods
BP GO:0000280 nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predict GO terms from Neighborhoods
BP GO:0000910 cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000911 cytokinesis by cell plate formation IEP Predict GO terms from Neighborhoods
BP GO:0001881 receptor recycling IEP Predict GO terms from Neighborhoods
BP GO:0002790 peptide secretion IEP Predict GO terms from Neighborhoods
BP GO:0003400 regulation of COPII vesicle coating IEP Predict GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003925 G protein activity IEP Predict GO terms from Neighborhoods
MF GO:0005527 macrolide binding IEP Predict GO terms from Neighborhoods
MF GO:0005528 FK506 binding IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0005788 endoplasmic reticulum lumen IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005930 axoneme IEP Predict GO terms from Neighborhoods
BP GO:0006457 protein folding IEP Predict GO terms from Neighborhoods
BP GO:0006694 steroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006696 ergosterol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006826 iron ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006997 nucleus organization IEP Predict GO terms from Neighborhoods
BP GO:0006998 nuclear envelope organization IEP Predict GO terms from Neighborhoods
BP GO:0007000 nucleolus organization IEP Predict GO terms from Neighborhoods
BP GO:0007005 mitochondrion organization IEP Predict GO terms from Neighborhoods
BP GO:0007006 mitochondrial membrane organization IEP Predict GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Predict GO terms from Neighborhoods
BP GO:0008204 ergosterol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009268 response to pH IEP Predict GO terms from Neighborhoods
BP GO:0009306 protein secretion IEP Predict GO terms from Neighborhoods
CC GO:0009504 cell plate IEP Predict GO terms from Neighborhoods
BP GO:0010447 response to acidic pH IEP Predict GO terms from Neighborhoods
MF GO:0015036 disulfide oxidoreductase activity IEP Predict GO terms from Neighborhoods
BP GO:0015833 peptide transport IEP Predict GO terms from Neighborhoods
BP GO:0016125 sterol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016126 sterol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016128 phytosteroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016129 phytosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Predict GO terms from Neighborhoods
BP GO:0019236 response to pheromone IEP Predict GO terms from Neighborhoods
BP GO:0019722 calcium-mediated signaling IEP Predict GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0019932 second-messenger-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0023061 signal release IEP Predict GO terms from Neighborhoods
BP GO:0030072 peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0030073 insulin secretion IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030496 midbody IEP Predict GO terms from Neighborhoods
CC GO:0030666 endocytic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030670 phagocytic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0030865 cortical cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0031122 cytoplasmic microtubule organization IEP Predict GO terms from Neighborhoods
MF GO:0031489 myosin V binding IEP Predict GO terms from Neighborhoods
CC GO:0031901 early endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0032400 melanosome localization IEP Predict GO terms from Neighborhoods
BP GO:0032401 establishment of melanosome localization IEP Predict GO terms from Neighborhoods
BP GO:0032402 melanosome transport IEP Predict GO terms from Neighborhoods
CC GO:0032588 trans-Golgi network membrane IEP Predict GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Predict GO terms from Neighborhoods
BP GO:0033157 regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0033572 transferrin transport IEP Predict GO terms from Neighborhoods
BP GO:0034599 cellular response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0034976 response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:0035592 establishment of protein localization to extracellular region IEP Predict GO terms from Neighborhoods
BP GO:0035773 insulin secretion involved in cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0042886 amide transport IEP Predict GO terms from Neighborhoods
BP GO:0043112 receptor metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043254 regulation of protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0043622 cortical microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0044070 regulation of anion transport IEP Predict GO terms from Neighborhoods
BP GO:0044107 cellular alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044108 cellular alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044232 organelle membrane contact site IEP Predict GO terms from Neighborhoods
CC GO:0044233 mitochondria-associated endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0045054 constitutive secretory pathway IEP Predict GO terms from Neighborhoods
BP GO:0045055 regulated exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045056 transcytosis IEP Predict GO terms from Neighborhoods
BP GO:0046165 alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046879 hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0046903 secretion IEP Predict GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Predict GO terms from Neighborhoods
MF GO:0048487 beta-tubulin binding IEP Predict GO terms from Neighborhoods
BP GO:0051211 anisotropic cell growth IEP Predict GO terms from Neighborhoods
BP GO:0051648 vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051650 establishment of vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051875 pigment granule localization IEP Predict GO terms from Neighborhoods
BP GO:0051904 pigment granule transport IEP Predict GO terms from Neighborhoods
BP GO:0051905 establishment of pigment granule localization IEP Predict GO terms from Neighborhoods
CC GO:0055038 recycling endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0061077 chaperone-mediated protein folding IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070863 positive regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0070971 endoplasmic reticulum exit site IEP Predict GO terms from Neighborhoods
BP GO:0071467 cellular response to pH IEP Predict GO terms from Neighborhoods
BP GO:0071468 cellular response to acidic pH IEP Predict GO terms from Neighborhoods
BP GO:0071692 protein localization to extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0071781 endoplasmic reticulum cisternal network IEP Predict GO terms from Neighborhoods
CC GO:0085035 haustorium IEP Predict GO terms from Neighborhoods
BP GO:0090113 regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0090316 positive regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0097242 amyloid-beta clearance IEP Predict GO terms from Neighborhoods
BP GO:0097306 cellular response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:0097307 response to farnesol IEP Predict GO terms from Neighborhoods
BP GO:0097308 cellular response to farnesol IEP Predict GO terms from Neighborhoods
BP GO:0097384 cellular lipid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0098563 intrinsic component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0098827 endoplasmic reticulum subcompartment IEP Predict GO terms from Neighborhoods
CC GO:0098993 anchored component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0150093 amyloid-beta clearance by transcytosis IEP Predict GO terms from Neighborhoods
BP GO:1902652 secondary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902653 secondary alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000008 regulation of protein localization to cell surface IEP Predict GO terms from Neighborhoods
BP GO:2001135 regulation of endocytic recycling IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027417 P-loop_NTPase 14 179
IPR005225 Small_GTP-bd_dom 16 157
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!