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  5. SOLTUB.AGRIA.G00000001876

SOLTUB.AGRIA.G00000001876


Description : Transposase tnp2


Gene families : OG_02_0000246 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001876
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_136

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000001354 No alias Transposase tnp2 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001354 No alias Transposase tnp2 0.02 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000001354 No alias Transposase tnp2 0.02 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000315 organellar large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0001756 somitogenesis IEP Predict GO terms from Neighborhoods
MF GO:0002094 polyprenyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0002684 positive regulation of immune system process IEP Predict GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0004310 farnesyl-diphosphate farnesyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004311 farnesyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004338 glucan exo-1,3-beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004565 beta-galactosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004596 peptide alpha-N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005762 mitochondrial large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Predict GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Predict GO terms from Neighborhoods
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006573 valine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006574 valine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006695 cholesterol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006722 triterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007064 mitotic sister chromatid cohesion IEP Predict GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Predict GO terms from Neighborhoods
BP GO:0008202 steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0008203 cholesterol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009063 cellular amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009083 branched-chain amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009714 chalcone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009715 chalcone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009812 flavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
MF GO:0010485 H4 histone acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016093 polyprenol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016094 polyprenol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016104 triterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016105 triterpenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016134 saponin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016135 saponin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016137 glycoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016138 glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016150 translation release factor activity, codon nonspecific IEP Predict GO terms from Neighborhoods
MF GO:0016210 naringenin-chalcone synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0016289 CoA hydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Predict GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0019348 dolichol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019408 dolichol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019741 pentacyclic triterpenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030638 polyketide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030639 polyketide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031365 N-terminal protein amino acid modification IEP Predict GO terms from Neighborhoods
CC GO:0031414 N-terminal protein acetyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0031415 NatA complex IEP Predict GO terms from Neighborhoods
BP GO:0033302 quercetin O-glucoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033329 kaempferol O-glucoside metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033907 beta-D-fucosidase activity IEP Predict GO terms from Neighborhoods
CC GO:0034081 polyketide synthase complex IEP Predict GO terms from Neighborhoods
BP GO:0034085 establishment of sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0034087 establishment of mitotic sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0035282 segmentation IEP Predict GO terms from Neighborhoods
BP GO:0040009 regulation of growth rate IEP Predict GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0042579 microbody IEP Predict GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0046165 alcohol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046395 carboxylic acid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046409 p-coumarate 3-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0046622 positive regulation of organ growth IEP Predict GO terms from Neighborhoods
MF GO:0047701 beta-L-arabinosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0050247 raucaffricine beta-glucosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0050267 rubber cis-polyprenylcistransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0050506 vomilenine glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050776 regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0050778 positive regulation of immune response IEP Predict GO terms from Neighborhoods
MF GO:0051996 squalene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0052858 peptidyl-lysine acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070126 mitochondrial translational termination IEP Predict GO terms from Neighborhoods
BP GO:0070601 centromeric sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0071731 response to nitric oxide IEP Predict GO terms from Neighborhoods
BP GO:0071962 mitotic sister chromatid cohesion, centromeric IEP Predict GO terms from Neighborhoods
BP GO:0072344 rescue of stalled ribosome IEP Predict GO terms from Neighborhoods
MF GO:0080083 beta-gentiobiose beta-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0090709 regulation of timing of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901696 cannabinoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902381 11-oxo-beta-amyrin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902382 11-oxo-beta-amyrin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902384 glycyrrhetinate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902386 glycyrrhetinate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902438 response to vanadate(3-) IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR025452 DUF4218 46 95
No external refs found!