SOLTUB.AGRIA.G00000018120

Description : Auxin efflux carrier component

Gene families : OG_02_0006017 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000018120
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_177

Type	GO Term	Name	Evidence	Source
CC	GO:0000323	lytic vacuole	IEA	AHRD
BP	GO:0000578	embryonic axis specification	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001666	response to hypoxia	IEA	AHRD
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005789	endoplasmic reticulum membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009555	pollen development	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009640	photomorphogenesis	IEA	AHRD
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009746	response to hexose	None	Extended
BP	GO:0009749	response to glucose	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009798	axis specification	None	Extended
BP	GO:0009880	embryonic pattern specification	None	Extended
BP	GO:0009908	flower development	IEA	AHRD
BP	GO:0009914	hormone transport	None	Extended
CC	GO:0009921	auxin efflux carrier complex	IEA	AHRD
CC	GO:0009925	basal plasma membrane	IEA	AHRD
BP	GO:0009926	auxin polar transport	None	Extended
BP	GO:0009942	longitudinal axis specification	IEA	AHRD
BP	GO:0009958	positive gravitropism	IEA	AHRD
BP	GO:0009965	leaf morphogenesis	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009968	negative regulation of signal transduction	None	Extended
CC	GO:0009986	cell surface	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	IEA	AHRD
BP	GO:0010104	regulation of ethylene-activated signaling pathway	None	Extended
BP	GO:0010105	negative regulation of ethylene-activated signaling pathway	IEA	AHRD
BP	GO:0010229	inflorescence development	IEA	AHRD
BP	GO:0010252	auxin homeostasis	IEA	AHRD
BP	GO:0010315	auxin export across the plasma membrane	IEA	AHRD
MF	GO:0010329	auxin efflux transmembrane transporter activity	IEA	AHRD
BP	GO:0010338	leaf formation	IEA	AHRD
BP	GO:0010358	leaf shaping	IEA	AHRD
BP	GO:0010540	basipetal auxin transport	IEA	AHRD
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010648	negative regulation of cell communication	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0010928	regulation of auxin mediated signaling pathway	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016049	cell growth	None	Extended
CC	GO:0016328	lateral plasma membrane	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023057	negative regulation of signaling	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0045177	apical part of cell	IEA	AHRD
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048532	anatomical structure arrangement	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048598	embryonic morphogenesis	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048766	root hair initiation	IEA	AHRD
BP	GO:0048767	root hair elongation	IEA	AHRD
BP	GO:0048826	cotyledon morphogenesis	IEA	AHRD
BP	GO:0048830	adventitious root development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0055085	transmembrane transport	IEA	AHRD
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0060918	auxin transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070297	regulation of phosphorelay signal transduction system	None	Extended
BP	GO:0070298	negative regulation of phosphorelay signal transduction system	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
MF	GO:0080161	auxin transmembrane transporter activity	None	Extended
BP	GO:0080162	endoplasmic reticulum to cytosol auxin transport	IEA	AHRD
BP	GO:0090567	reproductive shoot system development	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0098590	plasma membrane region	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140115	export across plasma membrane	None	Extended
BP	GO:0140352	export from cell	None	Extended
BP	GO:1901332	negative regulation of lateral root development	IEA	AHRD
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended
BP	GO:1902532	negative regulation of intracellular signal transduction	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000023	regulation of lateral root development	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000069	regulation of post-embryonic root development	None	Extended
BP	GO:2000280	regulation of root development	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000054	ribosomal subunit export from nucleus	IEP	Predict GO terms from Neighborhoods
CC	GO:0000138	Golgi trans cisterna	IEP	Predict GO terms from Neighborhoods
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0000372	Group I intron splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000376	RNA splicing, via transesterification reactions with guanosine as nucleophile	IEP	Predict GO terms from Neighborhoods
BP	GO:0000460	maturation of 5.8S rRNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0000913	preprophase band assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0001508	action potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0001522	pseudouridine synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001732	formation of cytoplasmic translation initiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0002943	tRNA dihydrouridine synthesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0003774	cytoskeletal motor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003777	microtubule motor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003916	DNA topoisomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004103	choline kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005365	myo-inositol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005638	lamin filament	IEP	Predict GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005874	microtubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0005880	nuclear microtubule	IEP	Predict GO terms from Neighborhoods
CC	GO:0005882	intermediate filament	IEP	Predict GO terms from Neighborhoods
BP	GO:0006265	DNA topological change	IEP	Predict GO terms from Neighborhoods
BP	GO:0006656	phosphatidylcholine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007017	microtubule-based process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007569	obsolete cell aging	IEP	Predict GO terms from Neighborhoods
MF	GO:0008017	microtubule binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008296	3'-5'-exodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009558	embryo sac cellularization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009663	plasmodesma organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009812	flavonoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009813	flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0009982	pseudouridine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010028	xanthophyll cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0010215	cellulose microfibril organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010245	radial microtubular system formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010981	regulation of cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015148	D-xylose transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015166	polyol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015168	glycerol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015293	symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015294	solute:cation symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015295	solute:proton symporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015575	mannitol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015576	sorbitol transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015591	D-ribose transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015631	tubulin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0015791	polyol transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016107	sesquiterpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016122	xanthophyll metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0017148	negative regulation of translation	IEP	Predict GO terms from Neighborhoods
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030016	myofibril	IEP	Predict GO terms from Neighborhoods
BP	GO:0030048	actin filament-based movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0031022	nuclear migration along microfilament	IEP	Predict GO terms from Neighborhoods
MF	GO:0031320	hexitol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0033290	eukaryotic 48S preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033750	ribosome localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0033838	flavonol-3-O-glucoside glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034249	negative regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034450	ubiquitin-ubiquitin ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035278	miRNA-mediated gene silencing by inhibition of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042255	ribosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0042256	mature ribosome assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0043290	apocarotenoid catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0043292	contractile fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0044304	main axon	IEP	Predict GO terms from Neighborhoods
BP	GO:0045652	regulation of megakaryocyte differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0046029	mannitol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046345	abscisic acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046422	violaxanthin de-epoxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046785	microtubule polymerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0047230	flavonol-3-O-glucoside L-rhamnosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0048531	beta-1,3-galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051566	anthocyanidin-3-glucoside rhamnosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051880	G-quadruplex DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0052747	sinapyl alcohol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070925	organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071103	DNA conformation change	IEP	Predict GO terms from Neighborhoods
BP	GO:0071368	cellular response to cytokinin stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071395	cellular response to jasmonic acid stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0080045	quercetin 3'-O-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0086001	cardiac muscle cell action potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0086065	cell communication involved in cardiac conduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0090408	phloem nitrate loading	IEP	Predict GO terms from Neighborhoods
MF	GO:0090448	glucosinolate:proton symporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090449	phloem glucosinolate loading	IEP	Predict GO terms from Neighborhoods
CC	GO:0099080	supramolecular complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0099081	supramolecular polymer	IEP	Predict GO terms from Neighborhoods
CC	GO:0099512	supramolecular fiber	IEP	Predict GO terms from Neighborhoods
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	Predict GO terms from Neighborhoods
BP	GO:0099515	actin filament-based transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0102311	8-hydroxygeraniol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106413	dihydrouridine synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0120256	olefinic compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1901038	cyanidin 3-O-glucoside metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001009	regulation of plant-type cell wall cellulose biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR014024	Auxin_eff_plant	53	238
IPR004776	Mem_trans	77	233

External Links

No external refs found!

SOLTUB.AGRIA.G00000018120

Expression Profile

Co-expression Networks

Functional Annotation