SOLTUB.AGRIA.G00000018341

Description : Nuclear transport factor 2

Gene families : OG_02_0000854 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000018341
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_212

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006405	RNA export from nucleus	None	Extended
BP	GO:0006406	mRNA export from nucleus	None	Extended
BP	GO:0006412	translation	IEA	AHRD
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006606	protein import into nucleus	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEA	AHRD
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0031267	small GTPase binding	IEA	AHRD
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
CC	GO:0042272	nuclear RNA export factor complex	IEA	AHRD
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044613	nuclear pore central transport channel	IEA	AHRD
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050657	nucleic acid transport	None	Extended
BP	GO:0050658	RNA transport	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051028	mRNA transport	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051236	establishment of RNA localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000303	response to superoxide	IEP	Predict GO terms from Neighborhoods
BP	GO:0000305	response to oxygen radical	IEP	Predict GO terms from Neighborhoods
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0000725	recombinational repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0001677	formation of translation initiation ternary complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001731	formation of translation preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001732	formation of cytoplasmic translation initiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0002082	regulation of oxidative phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002183	cytoplasmic translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002188	translation reinitiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003725	double-stranded RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004322	ferroxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004520	endodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004536	deoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005746	mitochondrial respirasome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005758	mitochondrial intermembrane space	IEP	Predict GO terms from Neighborhoods
BP	GO:0006121	mitochondrial electron transport, succinate to ubiquinone	IEP	Predict GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006749	glutathione metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006778	porphyrin-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006783	heme biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007553	regulation of ecdysteroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007554	regulation of ecdysteroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007626	locomotory behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0008016	regulation of heart contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0008088	axo-dendritic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008198	ferrous iron binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008199	ferric iron binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008340	determination of adult lifespan	IEP	Predict GO terms from Neighborhoods
BP	GO:0008344	adult locomotory behavior	IEP	Predict GO terms from Neighborhoods
MF	GO:0008821	crossover junction endodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009060	aerobic respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010039	response to iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010040	response to iron(II) ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010566	regulation of ketone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010720	positive regulation of cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010722	regulation of ferrochelatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010821	regulation of mitochondrion organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010823	negative regulation of mitochondrion organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010893	positive regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010970	transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	Predict GO terms from Neighborhoods
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0016282	eukaryotic 43S preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0016485	protein processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016530	metallochaperone activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016540	protein autoprocessing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016722	oxidoreductase activity, acting on metal ions	IEP	Predict GO terms from Neighborhoods
MF	GO:0016724	oxidoreductase activity, acting on metal ions, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016889	endodeoxyribonuclease activity, producing 3'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
BP	GO:0018282	metal incorporation into metallo-sulfur cluster	IEP	Predict GO terms from Neighborhoods
BP	GO:0018283	iron incorporation into metallo-sulfur cluster	IEP	Predict GO terms from Neighborhoods
BP	GO:0019218	regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019646	aerobic electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0019896	axonal transport of mitochondrion	IEP	Predict GO terms from Neighborhoods
BP	GO:0022904	respiratory electron transport chain	IEP	Predict GO terms from Neighborhoods
BP	GO:0030516	regulation of axon extension	IEP	Predict GO terms from Neighborhoods
BP	GO:0030534	adult behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0030705	cytoskeleton-dependent intracellular transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0030875	rDNA protrusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0031346	positive regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0031369	translation initiation factor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031970	organelle envelope lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032350	regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032352	positive regulation of hormone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0033290	eukaryotic 48S preinitiation complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0033557	Slx1-Slx4 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034614	cellular response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
BP	GO:0034643	establishment of mitochondrion localization, microtubule-mediated	IEP	Predict GO terms from Neighborhoods
MF	GO:0034986	iron chaperone activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040014	regulation of multicellular organism growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0040015	negative regulation of multicellular organism growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042168	heme metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042391	regulation of membrane potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0042762	regulation of sulfur metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043007	maintenance of rDNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0043023	ribosomal large subunit binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043024	ribosomal small subunit binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043457	regulation of cellular respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0043570	maintenance of DNA repeat elements	IEP	Predict GO terms from Neighborhoods
BP	GO:0044057	regulation of system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045333	cellular respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0045773	positive regulation of axon extension	IEP	Predict GO terms from Neighborhoods
BP	GO:0045823	positive regulation of heart contraction	IEP	Predict GO terms from Neighborhoods
BP	GO:0045940	positive regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045966	positive regulation of ecdysteroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045998	positive regulation of ecdysteroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046886	positive regulation of hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0047497	mitochondrion transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0048640	negative regulation of developmental growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0050767	regulation of neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050769	positive regulation of neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050770	regulation of axonogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050772	positive regulation of axonogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050810	regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051339	regulation of lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051341	regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051349	positive regulation of lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051353	positive regulation of oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051646	mitochondrion localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051654	establishment of mitochondrion localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051881	regulation of mitochondrial membrane potential	IEP	Predict GO terms from Neighborhoods
BP	GO:0051962	positive regulation of nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0055072	iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061387	regulation of extent of cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0070301	cellular response to hydrogen peroxide	IEP	Predict GO terms from Neighborhoods
CC	GO:0070469	respirasome	IEP	Predict GO terms from Neighborhoods
CC	GO:0070993	translation preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0072384	organelle transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0090030	regulation of steroid hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090031	positive regulation of steroid hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090199	regulation of release of cytochrome c from mitochondria	IEP	Predict GO terms from Neighborhoods
BP	GO:0090201	negative regulation of release of cytochrome c from mitochondria	IEP	Predict GO terms from Neighborhoods
BP	GO:0098930	axonal transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0099111	microtubule-based transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0106332	ds/ssDNA junction-specific dsDNA endonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901857	positive regulation of cellular respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:1903329	regulation of iron-sulfur cluster assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1903522	regulation of blood circulation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903524	positive regulation of blood circulation	IEP	Predict GO terms from Neighborhoods
BP	GO:1903715	regulation of aerobic respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:1903862	positive regulation of oxidative phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904229	regulation of succinate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904231	positive regulation of succinate dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904232	regulation of aconitate hydratase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1904234	positive regulation of aconitate hydratase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:1990221	L-cysteine desulfurase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:1990238	double-stranded DNA endodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:2001233	regulation of apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2001234	negative regulation of apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002075	NTF2_dom	7	120
IPR032710	NTF2-like_dom_sf	3	121

External Links

No external refs found!

SOLTUB.AGRIA.G00000018341

Expression Profile

Co-expression Networks

Functional Annotation