SOLTUB.AGRIA.G00000018433

Description : GTP-binding nuclear protein

Gene families : OG_02_0000792 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000018433
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_37

Type	GO Term	Name	Evidence	Source
BP	GO:0000054	ribosomal subunit export from nucleus	IEA	AHRD
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
MF	GO:0005525	GTP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005794	Golgi apparatus	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006405	RNA export from nucleus	None	Extended
BP	GO:0006406	mRNA export from nucleus	None	Extended
BP	GO:0006606	protein import into nucleus	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	IEA	AHRD
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007276	gamete generation	None	Extended
BP	GO:0007281	germ cell development	None	Extended
BP	GO:0007292	female gamete generation	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009792	embryo development ending in birth or egg hatching	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0031503	protein-containing complex localization	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0033750	ribosome localization	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046686	response to cadmium ion	IEA	AHRD
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048468	cell development	None	Extended
BP	GO:0048477	oogenesis	IEA	AHRD
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050657	nucleic acid transport	None	Extended
BP	GO:0050658	RNA transport	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051028	mRNA transport	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051236	establishment of RNA localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051656	establishment of organelle localization	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000028	ribosomal small subunit assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0000249	C-22 sterol desaturase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Predict GO terms from Neighborhoods
BP	GO:0001541	ovarian follicle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002429	immune response-activating cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002768	immune response-regulating cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003746	translation elongation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005085	guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005200	structural constituent of cytoskeleton	IEP	Predict GO terms from Neighborhoods
CC	GO:0005816	spindle pole body	IEP	Predict GO terms from Neighborhoods
CC	GO:0005829	cytosol	IEP	Predict GO terms from Neighborhoods
CC	GO:0005851	eukaryotic translation initiation factor 2B complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005853	eukaryotic translation elongation factor 1 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006413	translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006414	translational elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006694	steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006950	response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007010	cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007018	microtubule-based movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0007051	spindle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007052	mitotic spindle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007080	mitotic metaphase plate congression	IEP	Predict GO terms from Neighborhoods
BP	GO:0007097	nuclear migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0007272	ensheathment of neurons	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008366	axon ensheathment	IEP	Predict GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009408	response to heat	IEP	Predict GO terms from Neighborhoods
BP	GO:0009555	pollen development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009566	fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Predict GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009644	response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009749	response to glucose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009880	embryonic pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0010053	root epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010088	phloem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010243	response to organonitrogen compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0010450	inflorescence meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010970	transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0014003	oligodendrocyte development	IEP	Predict GO terms from Neighborhoods
CC	GO:0014069	postsynaptic density	IEP	Predict GO terms from Neighborhoods
CC	GO:0015935	small ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0016125	sterol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016126	sterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	Predict GO terms from Neighborhoods
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0021766	hippocampus development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021782	glial cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0030099	myeloid cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030218	erythrocyte differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030473	nuclear migration along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0030490	maturation of SSU-rRNA	IEP	Predict GO terms from Neighborhoods
CC	GO:0030496	midbody	IEP	Predict GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030705	cytoskeleton-dependent intracellular transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0031369	translation initiation factor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031505	fungal-type cell wall organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0032045	guanyl-nucleotide exchange factor complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035266	meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042552	myelination	IEP	Predict GO terms from Neighborhoods
CC	GO:0042788	polysomal ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0043087	regulation of GTPase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0043434	response to peptide hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0048027	mRNA 5'-UTR binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048229	gametophyte development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048444	floral organ morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048448	stamen morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048461	flower structural organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0048532	anatomical structure arrangement	IEP	Predict GO terms from Neighborhoods
BP	GO:0048832	specification of plant organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048833	specification of floral organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0050000	chromosome localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050790	regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050851	antigen receptor-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0050852	T cell receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051099	positive regulation of binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051303	establishment of chromosome localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051310	metaphase plate congression	IEP	Predict GO terms from Neighborhoods
BP	GO:0051647	nucleus localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0055063	sulfate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055081	anion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070181	small ribosomal subunit rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0070704	sterol desaturase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071484	cellular response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071486	cellular response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071852	fungal-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072384	organelle transport along microtubule	IEP	Predict GO terms from Neighborhoods
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0072686	mitotic spindle	IEP	Predict GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0099111	microtubule-based transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0099572	postsynaptic specialization	IEP	Predict GO terms from Neighborhoods
BP	GO:1901652	response to peptide	IEP	Predict GO terms from Neighborhoods
BP	GO:1902850	microtubule cytoskeleton organization involved in mitosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1904424	regulation of GTP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1905097	regulation of guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1905098	negative regulation of guanyl-nucleotide exchange factor activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR027417	P-loop_NTPase	14	180
IPR001806	Small_GTPase	15	171
IPR005225	Small_GTP-bd_dom	14	164

External Links

No external refs found!

SOLTUB.AGRIA.G00000018433

Expression Profile

Co-expression Networks

Functional Annotation