SOLTUB.AGRIA.G00000018744


Description : ARF-GAP domain 2


Gene families : OG_02_0043717 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000018744
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_16


Type GO Term Name Evidence Source
CC GO:0001726 ruffle IEA AHRD
BP GO:0001764 neuron migration IEA AHRD
MF GO:0001786 phosphatidylserine binding IEA AHRD
CC GO:0002102 podosome IEA AHRD
MF GO:0003779 actin binding IEA AHRD
MF GO:0003924 GTPase activity IEA AHRD
MF GO:0005096 GTPase activator activity IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
MF GO:0005525 GTP binding IEA AHRD
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA AHRD
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005802 trans-Golgi network IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0009651 response to salt stress IEA AHRD
BP GO:0009733 response to auxin IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0009965 leaf morphogenesis IEA AHRD
CC GO:0010008 endosome membrane IEA AHRD
BP GO:0010051 xylem and phloem pattern formation IEA AHRD
BP GO:0010087 phloem or xylem histogenesis IEA AHRD
BP GO:0010187 negative regulation of seed germination IEA AHRD
BP GO:0010975 regulation of neuron projection development IEA AHRD
BP GO:0014068 positive regulation of phosphatidylinositol 3-kinase signaling IEA AHRD
BP GO:0015031 protein transport IEA AHRD
MF GO:0019901 protein kinase binding IEA AHRD
BP GO:0030036 actin cytoskeleton organization IEA AHRD
CC GO:0030139 endocytic vesicle IEA AHRD
CC GO:0030140 trans-Golgi network transport vesicle IEA AHRD
MF GO:0030295 protein kinase activator activity IEA AHRD
CC GO:0030426 growth cone IEA AHRD
MF GO:0031267 small GTPase binding IEA AHRD
BP GO:0032456 endocytic recycling IEA AHRD
BP GO:0033601 positive regulation of mammary gland epithelial cell proliferation IEA AHRD
MF GO:0035014 phosphatidylinositol 3-kinase regulator activity IEA AHRD
CC GO:0035618 root hair IEA AHRD
BP GO:0042177 negative regulation of protein catabolic process IEA AHRD
CC GO:0043197 dendritic spine IEA AHRD
BP GO:0043524 negative regulation of neuron apoptotic process IEA AHRD
BP GO:0045860 positive regulation of protein kinase activity IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0046427 positive regulation of receptor signaling pathway via JAK-STAT IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
BP GO:0048259 regulation of receptor-mediated endocytosis IEA AHRD
BP GO:0048768 root hair cell tip growth IEA AHRD
BP GO:0055059 asymmetric neuroblast division IEA AHRD
BP GO:0060271 cilium assembly IEA AHRD
BP GO:0060582 cell fate determination involved in pattern specification IEA AHRD
BP GO:0060749 mammary gland alveolus development IEA AHRD
BP GO:0061000 negative regulation of dendritic spine development IEA AHRD
BP GO:0072375 medium-term memory IEA AHRD
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEA AHRD
CC GO:0090543 Flemming body IEA AHRD
BP GO:0090630 activation of GTPase activity IEA AHRD
BP GO:1903527 positive regulation of membrane tubulation IEA AHRD
BP GO:1990090 cellular response to nerve growth factor stimulus IEA AHRD
BP GO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0000470 maturation of LSU-rRNA IEP Predict GO terms from Neighborhoods
CC GO:0005874 microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005881 cytoplasmic microtubule IEP Predict GO terms from Neighborhoods
BP GO:0006071 glycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Predict GO terms from Neighborhoods
BP GO:0006505 GPI anchor metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006506 GPI anchor biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006664 glycolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Predict GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Predict GO terms from Neighborhoods
MF GO:0008374 O-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009247 glycolipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009804 coumarin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009805 coumarin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009812 flavonoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009813 flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010090 trichome morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010421 hydrogen peroxide-mediated programmed cell death IEP Predict GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Predict GO terms from Neighborhoods
MF GO:0016746 acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Predict GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0019400 alditol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019405 alditol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019563 glycerol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019751 polyol metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0030276 clathrin binding IEP Predict GO terms from Neighborhoods
BP GO:0030447 filamentous growth IEP Predict GO terms from Neighborhoods
BP GO:0031109 microtubule polymerization or depolymerization IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0034614 cellular response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0035459 vesicle cargo loading IEP Predict GO terms from Neighborhoods
BP GO:0035652 clathrin-coated vesicle cargo loading IEP Predict GO terms from Neighborhoods
BP GO:0036170 filamentous growth of a population of unicellular organisms in response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0036180 filamentous growth of a population of unicellular organisms in response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0036473 cell death in response to oxidative stress IEP Predict GO terms from Neighborhoods
BP GO:0036474 cell death in response to hydrogen peroxide IEP Predict GO terms from Neighborhoods
BP GO:0042594 response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0042710 biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0043473 pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0044010 single-species biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0044011 single-species biofilm formation on inanimate substrate IEP Predict GO terms from Neighborhoods
BP GO:0044182 filamentous growth of a population of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:0044275 cellular carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046164 alcohol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046174 polyol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046467 membrane lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046785 microtubule polymerization IEP Predict GO terms from Neighborhoods
MF GO:0047180 salutaridinol 7-O-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0051258 protein polymerization IEP Predict GO terms from Neighborhoods
CC GO:0055028 cortical microtubule IEP Predict GO terms from Neighborhoods
BP GO:0060858 vesicle-mediated transport involved in floral organ abscission IEP Predict GO terms from Neighborhoods
BP GO:0060866 leaf abscission IEP Predict GO terms from Neighborhoods
BP GO:0090605 submerged biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0090609 single-species submerged biofilm formation IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Predict GO terms from Neighborhoods
BP GO:0098630 aggregation of unicellular organisms IEP Predict GO terms from Neighborhoods
BP GO:0098743 cell aggregation IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
CC GO:0099081 supramolecular polymer IEP Predict GO terms from Neighborhoods
CC GO:0099512 supramolecular fiber IEP Predict GO terms from Neighborhoods
CC GO:0099513 polymeric cytoskeletal fiber IEP Predict GO terms from Neighborhoods
MF GO:0102801 anthocyanin 5-O-glucoside-4'''-O-malonyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0106145 scopoletin 8-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0106147 fraxetin biosynthesis IEP Predict GO terms from Neighborhoods
BP GO:1901616 organic hydroxy compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903509 liposaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904400 response to Thyroid stimulating hormone IEP Predict GO terms from Neighborhoods
BP GO:1904401 cellular response to Thyroid stimulating hormone IEP Predict GO terms from Neighborhoods
BP GO:1904587 response to glycoprotein IEP Predict GO terms from Neighborhoods
BP GO:1904588 cellular response to glycoprotein IEP Predict GO terms from Neighborhoods
BP GO:1990641 response to iron ion starvation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001164 ArfGAP_dom 141 197
IPR037278 ARFGAP/RecO 142 198
IPR024096 NO_sig/Golgi_transp_ligand-bd 13 50
No external refs found!