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  5. SOLTUB.AGRIA.G00000019024

SOLTUB.AGRIA.G00000019024


Description : F-box protein sne


Gene families : OG_02_0019757 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019024
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_117


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0009845 seed germination IEA AHRD
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEA AHRD
BP GO:0010162 seed dormancy process IEA AHRD
BP GO:0010265 SCF complex assembly IEA AHRD
CC GO:0019005 SCF ubiquitin ligase complex IEA AHRD
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:0048831 regulation of shoot system development IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0000160 phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000493 box H/ACA snoRNP assembly IEP Predict GO terms from Neighborhoods
BP GO:0000723 telomere maintenance IEP Predict GO terms from Neighborhoods
MF GO:0000976 transcription cis-regulatory region binding IEP Predict GO terms from Neighborhoods
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Predict GO terms from Neighborhoods
BP GO:0001558 regulation of cell growth IEP Predict GO terms from Neighborhoods
MF GO:0001653 peptide receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0001786 phosphatidylserine binding IEP Predict GO terms from Neighborhoods
MF GO:0002094 polyprenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004565 beta-galactosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004672 protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0005102 signaling receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Predict GO terms from Neighborhoods
MF GO:0005544 calcium-dependent phospholipid binding IEP Predict GO terms from Neighborhoods
CC GO:0005697 telomerase holoenzyme complex IEP Predict GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0006109 regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006110 regulation of glycolytic process IEP Predict GO terms from Neighborhoods
BP GO:0006140 regulation of nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006278 RNA-templated DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006468 protein phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006638 neutral lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006639 acylglycerol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006641 triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006833 water transport IEP Predict GO terms from Neighborhoods
BP GO:0006935 chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0007004 telomere maintenance via telomerase IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
BP GO:0007389 pattern specification process IEP Predict GO terms from Neighborhoods
MF GO:0008417 fucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009266 response to temperature stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009725 response to hormone IEP Predict GO terms from Neighborhoods
BP GO:0009744 response to sucrose IEP Predict GO terms from Neighborhoods
BP GO:0009755 hormone-mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009856 pollination IEP Predict GO terms from Neighborhoods
BP GO:0009873 ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009934 regulation of meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0009943 adaxial/abaxial axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009947 centrolateral axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009954 proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0009956 radial pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0009965 leaf morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009969 xyloglucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010074 maintenance of meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010075 regulation of meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010078 maintenance of root meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010082 regulation of root meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010088 phloem development IEP Predict GO terms from Neighborhoods
BP GO:0010183 pollen tube guidance IEP Predict GO terms from Neighborhoods
BP GO:0010187 negative regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Predict GO terms from Neighborhoods
BP GO:0010311 lateral root formation IEP Predict GO terms from Neighborhoods
BP GO:0010449 root meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010453 regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010482 regulation of epidermal cell division IEP Predict GO terms from Neighborhoods
BP GO:0010492 maintenance of shoot apical meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010581 regulation of starch biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010654 apical cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010833 telomere maintenance via telomere lengthening IEP Predict GO terms from Neighborhoods
BP GO:0010865 stipule development IEP Predict GO terms from Neighborhoods
BP GO:0010962 regulation of glucan biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015665 alcohol transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
BP GO:0016093 polyprenol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016094 polyprenol biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0016310 phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predict GO terms from Neighborhoods
CC GO:0017119 Golgi transport complex IEP Predict GO terms from Neighborhoods
BP GO:0017156 calcium-ion regulated exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0019217 regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019348 dolichol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019408 dolichol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019432 triglyceride biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019827 stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022604 regulation of cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0030104 water homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0030427 site of polarized growth IEP Predict GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0031118 rRNA pseudouridine synthesis IEP Predict GO terms from Neighborhoods
BP GO:0031120 snRNA pseudouridine synthesis IEP Predict GO terms from Neighborhoods
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0031429 box H/ACA snoRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032200 telomere organization IEP Predict GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0032881 regulation of polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Predict GO terms from Neighborhoods
MF GO:0033612 receptor serine/threonine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0034285 response to disaccharide IEP Predict GO terms from Neighborhoods
MF GO:0034513 box H/ACA snoRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0035266 meristem growth IEP Predict GO terms from Neighborhoods
CC GO:0035838 growing cell tip IEP Predict GO terms from Neighborhoods
MF GO:0038023 signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0040019 positive regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0040031 snRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0042044 fluid transport IEP Predict GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Predict GO terms from Neighborhoods
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042330 taxis IEP Predict GO terms from Neighborhoods
BP GO:0042592 homeostatic process IEP Predict GO terms from Neighborhoods
BP GO:0042659 regulation of cell fate specification IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
BP GO:0042996 regulation of Golgi to plasma membrane protein transport IEP Predict GO terms from Neighborhoods
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predict GO terms from Neighborhoods
BP GO:0043470 regulation of carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043565 sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0043621 protein self-association IEP Predict GO terms from Neighborhoods
BP GO:0045017 glycerolipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0045595 regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045723 positive regulation of fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045834 positive regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045923 positive regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045995 regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0046460 neutral lipid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046463 acylglycerol biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046486 glycerolipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046889 positive regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
CC GO:0048226 Casparian strip IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048314 embryo sac morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0048353 primary endosperm nucleus IEP Predict GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0048437 floral organ development IEP Predict GO terms from Neighborhoods
BP GO:0048446 petal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048482 plant ovule morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048638 regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048825 cotyledon development IEP Predict GO terms from Neighborhoods
BP GO:0048827 phyllome development IEP Predict GO terms from Neighborhoods
BP GO:0048830 adventitious root development IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048859 formation of anatomical boundary IEP Predict GO terms from Neighborhoods
BP GO:0048878 chemical homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0050267 rubber cis-polyprenylcistransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0050918 positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051240 positive regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051276 chromosome organization IEP Predict GO terms from Neighborhoods
CC GO:0051286 cell tip IEP Predict GO terms from Neighborhoods
BP GO:0051302 regulation of cell division IEP Predict GO terms from Neighborhoods
BP GO:0051510 regulation of unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0055065 metal ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055067 monovalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055075 potassium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055080 cation homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0060089 molecular transducer activity IEP Predict GO terms from Neighborhoods
CC GO:0060187 cell pole IEP Predict GO terms from Neighborhoods
BP GO:0060771 phyllotactic patterning IEP Predict GO terms from Neighborhoods
BP GO:0060772 leaf phyllotactic patterning IEP Predict GO terms from Neighborhoods
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP Predict GO terms from Neighborhoods
BP GO:0062013 positive regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Predict GO terms from Neighborhoods
BP GO:0070206 protein trimerization IEP Predict GO terms from Neighborhoods
CC GO:0072588 box H/ACA RNP complex IEP Predict GO terms from Neighborhoods
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0080037 negative regulation of cytokinin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0080050 regulation of seed development IEP Predict GO terms from Neighborhoods
BP GO:0080092 regulation of pollen tube growth IEP Predict GO terms from Neighborhoods
BP GO:0080166 stomium development IEP Predict GO terms from Neighborhoods
CC GO:0090404 pollen tube tip IEP Predict GO terms from Neighborhoods
CC GO:0090406 pollen tube IEP Predict GO terms from Neighborhoods
MF GO:0090440 abscisic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090451 cotyledon boundary formation IEP Predict GO terms from Neighborhoods
BP GO:0090506 axillary shoot meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0090691 formation of plant organ boundary IEP Predict GO terms from Neighborhoods
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0090708 specification of plant organ axis polarity IEP Predict GO terms from Neighborhoods
BP GO:0098727 maintenance of cell number IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0099402 plant organ development IEP Predict GO terms from Neighborhoods
MF GO:0106310 protein serine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0110127 phloem unloading IEP Predict GO terms from Neighborhoods
BP GO:0110128 phloem sucrose unloading IEP Predict GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Predict GO terms from Neighborhoods
BP GO:1900542 regulation of purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901957 regulation of cutin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901959 positive regulation of cutin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902459 positive regulation of stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:1903224 regulation of endodermal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903578 regulation of ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1905177 tracheary element differentiation IEP Predict GO terms from Neighborhoods
BP GO:1905392 plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1905421 regulation of plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1990110 callus formation IEP Predict GO terms from Neighborhoods
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000012 regulation of auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:2000014 regulation of endosperm development IEP Predict GO terms from Neighborhoods
BP GO:2000036 regulation of stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:2000067 regulation of root morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036047 F-box-like_dom_sf 17 82
IPR001810 F-box_dom 17 57
No external refs found!