SOLTUB.AGRIA.G00000019095


Description : Laccase


Gene families : OG_02_0033790 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019095
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_116


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0009809 lignin biosynthetic process IEA AHRD
BP GO:0009834 plant-type secondary cell wall biogenesis IEA AHRD
BP GO:0010228 vegetative to reproductive phase transition of meristem IEA AHRD
MF GO:0016491 oxidoreductase activity IEA AHRD
BP GO:0046688 response to copper ion IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
CC GO:0048226 Casparian strip IEA AHRD
BP GO:0080022 primary root development IEA AHRD
Type GO Term Name Evidence Source
BP GO:0002215 defense response to nematode IEP Predict GO terms from Neighborhoods
BP GO:0002683 negative regulation of immune system process IEP Predict GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predict GO terms from Neighborhoods
CC GO:0019897 extrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0042743 hydrogen peroxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042744 hydrogen peroxide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0050777 negative regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0072593 reactive oxygen species metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0098869 cellular oxidant detoxification IEP Predict GO terms from Neighborhoods
BP GO:1900378 positive regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901141 regulation of lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901428 regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901430 positive regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1990748 cellular detoxification IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_C 101 236
IPR008972 Cupredoxin 28 254
No external refs found!