SOLTUB.AGRIA.G00000019163

Description : CONSTANS-like zinc finger protein

Gene families : OG_02_0019769 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019163
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_48

Type	GO Term	Name	Evidence	Source
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007623	circadian rhythm	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	IEA	AHRD
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	None	Extended
BP	GO:0010099	regulation of photomorphogenesis	IEA	AHRD
BP	GO:0010114	response to red light	None	Extended
BP	GO:0010161	red light signaling pathway	IEA	AHRD
BP	GO:0010218	response to far red light	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010629	negative regulation of gene expression	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
MF	GO:0030674	protein-macromolecule adaptor activity	IEA	AHRD
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048577	negative regulation of short-day photoperiodism, flowering	IEA	AHRD
BP	GO:0048579	negative regulation of long-day photoperiodism, flowering	IEA	AHRD
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048586	regulation of long-day photoperiodism, flowering	None	Extended
BP	GO:0048587	regulation of short-day photoperiodism, flowering	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060688	regulation of morphogenesis of a branching structure	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0071491	cellular response to red light	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905428	regulation of plant organ formation	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000028	regulation of photoperiodism, flowering	None	Extended
BP	GO:2000030	regulation of response to red or far red light	None	Extended
BP	GO:2000032	regulation of secondary shoot formation	IEA	AHRD
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000242	negative regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000210	NAD+ diphosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0001055	RNA polymerase II activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0001882	nucleoside binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0003333	amino acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0003838	sterol 24-C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003883	CTP synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003986	acetyl-CoA hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004551	dinucleotide phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004575	sucrose alpha-glucosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004612	phosphoenolpyruvate carboxykinase (ATP) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004613	phosphoenolpyruvate carboxykinase (GTP) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004708	MAP kinase kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004778	succinyl-CoA hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005313	L-glutamate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005665	RNA polymerase II, core complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005666	RNA polymerase III complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0005987	sucrose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005996	monosaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006006	glucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006083	acetate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006094	gluconeogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006104	succinyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006195	purine nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006241	CTP biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006696	ergosterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006835	dicarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006865	amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008156	negative regulation of DNA replication	IEP	Predict GO terms from Neighborhoods
MF	GO:0008169	C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0008204	ergosterol metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008893	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009147	pyrimidine nucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009148	pyrimidine nucleoside triphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009154	purine ribonucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009165	nucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009208	pyrimidine ribonucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009209	pyrimidine ribonucleoside triphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009261	ribonucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009313	oligosaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009986	cell surface	IEP	Predict GO terms from Neighborhoods
CC	GO:0010282	senescence-associated vacuole	IEP	Predict GO terms from Neighborhoods
MF	GO:0010331	gibberellin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0010930	negative regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0010945	CoA pyrophosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015172	acidic amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015180	L-alanine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015183	L-aspartate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015711	organic anion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015757	galactose transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015802	basic amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015807	L-amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015808	L-alanine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015849	organic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015936	coenzyme A metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015937	coenzyme A biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015938	coenzyme A catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0015976	carbon utilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0016036	cellular response to phosphate starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016289	CoA hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016794	diphosphoric monoester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019236	response to pheromone	IEP	Predict GO terms from Neighborhoods
BP	GO:0019318	hexose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019319	hexose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0022858	alanine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030797	24-methylenesterol C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0031139	positive regulation of conjugation with cellular fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0032328	alanine transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0032549	ribonucleoside binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0032578	aleurone grain membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032648	regulation of interferon-beta production	IEP	Predict GO terms from Neighborhoods
BP	GO:0032728	positive regulation of interferon-beta production	IEP	Predict GO terms from Neighborhoods
BP	GO:0032876	negative regulation of DNA endoreduplication	IEP	Predict GO terms from Neighborhoods
BP	GO:0033869	nucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0033987	2-hydroxyisoflavanone dehydratase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034031	ribonucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034034	purine nucleoside bisphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036112	medium-chain fatty-acyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036114	medium-chain fatty-acyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036115	fatty-acyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043090	amino acid import	IEP	Predict GO terms from Neighborhoods
BP	GO:0044107	cellular alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044108	cellular alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044580	butyryl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045176	apical protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0046036	CTP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046287	isoflavonoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046352	disaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046356	acetyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046942	carboxylic acid transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047994	hydroxymethylglutaryl-CoA hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050873	brown fat cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0052575	carbohydrate localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0052576	carbohydrate storage	IEP	Predict GO terms from Neighborhoods
BP	GO:0070778	L-aspartate transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071836	nectar secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090333	regulation of stomatal closure	IEP	Predict GO terms from Neighborhoods
MF	GO:0090599	alpha-glucosidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0097268	cytoophidium	IEP	Predict GO terms from Neighborhoods
BP	GO:0097384	cellular lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901289	succinyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901569	fatty acid derivative catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902457	negative regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1902475	L-alpha-amino acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902858	propionyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902859	propionyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1990169	stress response to copper ion	IEP	Predict GO terms from Neighborhoods
BP	GO:2000104	negative regulation of DNA-templated DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:2001293	malonyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001294	malonyl-CoA catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	366	408
IPR000315	Znf_B-box	3	44

External Links

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SOLTUB.AGRIA.G00000019163

Expression Profile

Co-expression Networks

Functional Annotation