Coexpression cluster: Cluster_48 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity 2.6% (2/77) 7.99 2.3e-05 0.008955
GO:0006865 amino acid transport 6.49% (5/77) 3.99 1.7e-05 0.009851
GO:0015171 amino acid transmembrane transporter activity 6.49% (5/77) 4.16 9e-06 0.011062
GO:0016829 lyase activity 11.69% (9/77) 2.42 4.7e-05 0.013637
GO:0016830 carbon-carbon lyase activity 6.49% (5/77) 3.5 8.3e-05 0.016307
GO:0003333 amino acid transmembrane transport 5.19% (4/77) 4.02 0.000113 0.016494
GO:0015179 L-amino acid transmembrane transporter activity 5.19% (4/77) 4.19 7.1e-05 0.016652
GO:0010341 gibberellin carboxyl-O-methyltransferase activity 2.6% (2/77) 6.99 0.000106 0.017819
GO:0004611 phosphoenolpyruvate carboxykinase activity 2.6% (2/77) 6.67 0.000171 0.022217
GO:0046658 anchored component of plasma membrane 6.49% (5/77) 3.24 0.000193 0.022594
GO:0031226 intrinsic component of plasma membrane 9.09% (7/77) 2.52 0.000223 0.023726
GO:0043090 amino acid import 2.6% (2/77) 6.4 0.00025 0.024376
GO:0010340 carboxyl-O-methyltransferase activity 2.6% (2/77) 6.29 0.000295 0.026558
GO:0005342 organic acid transmembrane transporter activity 6.49% (5/77) 2.9 0.000572 0.04471
GO:0046943 carboxylic acid transmembrane transporter activity 6.49% (5/77) 2.9 0.000572 0.04471
GO:1902475 L-alpha-amino acid transmembrane transport 3.9% (3/77) 4.15 0.000669 0.046103
GO:0015976 carbon utilization 2.6% (2/77) 5.67 0.000711 0.046307
GO:0016790 thiolester hydrolase activity 3.9% (3/77) 4.16 0.000646 0.047343
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_66 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_71 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_87 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_102 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_107 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_119 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_120 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_133 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_142 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_149 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_164 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_180 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_253 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_13 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_17 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_20 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_43 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (77) (download table)

InterPro Domains

GO Terms

Family Terms