SOLTUB.AGRIA.G00000019249

Description : 1-aminocyclopropane-1-carboxylate synthase

Gene families : OG_02_0023658 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019249
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_93

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	cellular amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009612	response to mechanical stimulus	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009692	ethylene metabolic process	None	Extended
BP	GO:0009693	ethylene biosynthetic process	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEA	AHRD
BP	GO:0009753	response to jasmonic acid	IEA	AHRD
BP	GO:0009835	fruit ripening	IEA	AHRD
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	IEA	AHRD
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016846	carbon-sulfur lyase activity	None	Extended
MF	GO:0016847	1-aminocyclopropane-1-carboxylate synthase activity	IEA	AHRD
BP	GO:0018871	1-aminocyclopropane-1-carboxylate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042218	1-aminocyclopropane-1-carboxylate biosynthetic process	IEA	AHRD
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043449	cellular alkene metabolic process	None	Extended
BP	GO:0043450	alkene biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051301	cell division	IEA	AHRD
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000325	plant-type vacuole	IEP	Predict GO terms from Neighborhoods
MF	GO:0003987	acetate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004022	alcohol dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004737	pyruvate decarboxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005324	long-chain fatty acid transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006083	acetate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006560	proline metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006561	proline biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006690	icosanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006857	oligopeptide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0008281	sulfonylurea receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008559	ABC-type xenobiotic transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009403	toxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009404	toxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009750	response to fructose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009756	carbohydrate mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0009803	cinnamic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009806	lignan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009807	lignan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010182	sugar mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0010290	chlorophyll catabolite transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010301	xanthoxin dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010597	green leaf volatile biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015431	ABC-type glutathione S-conjugate transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015645	fatty acid ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015833	peptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015908	fatty acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015909	long-chain fatty acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015911	long-chain fatty acid import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0015914	phospholipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016098	monoterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016099	monoterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016144	S-glycoside biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016323	basolateral plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0016405	CoA-ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016477	cell migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016831	carboxy-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016878	acid-thiol ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018455	alcohol dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018458	isopiperitenol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018459	carveol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0018858	benzoate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019372	lipoxygenase pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019605	butyrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019758	glycosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019761	glucosinolate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030007	cellular potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030335	positive regulation of cell migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031524	menthol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031525	menthol biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031956	medium-chain fatty acid-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033700	phospholipid efflux	IEP	Predict GO terms from Neighborhoods
MF	GO:0034040	ATPase-coupled lipid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034059	response to anoxia	IEP	Predict GO terms from Neighborhoods
MF	GO:0034634	glutathione transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034635	glutathione transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034775	glutathione transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035443	tripeptide transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035672	oligopeptide transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0040017	positive regulation of locomotion	IEP	Predict GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042886	amide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042908	xenobiotic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042937	tripeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042939	tripeptide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0043759	methylbutanoate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0044539	long-chain fatty acid import into cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046165	alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046459	short-chain fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046618	xenobiotic export from cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0047760	butyrate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048870	cell motility	IEP	Predict GO terms from Neighborhoods
MF	GO:0050218	propionate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050997	quaternary ammonium group binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051260	protein homooligomerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051262	protein tetramerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051289	protein homotetramerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0052314	phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0055075	potassium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060326	cell chemotaxis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072337	modified amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0072348	sulfur compound transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0072349	modified amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0098739	import across plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0102911	(-)-secoisolariciresinol dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106286	(E)-caffeate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106290	trans-cinnamate-CoA ligase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140115	export across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0140354	lipid import into cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0140359	ABC-type transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140657	ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901214	regulation of neuron death	IEP	Predict GO terms from Neighborhoods
BP	GO:1901215	negative regulation of neuron death	IEP	Predict GO terms from Neighborhoods
BP	GO:1901527	abscisic acid-activated signaling pathway involved in stomatal movement	IEP	Predict GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Predict GO terms from Neighborhoods
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1902001	fatty acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902652	secondary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902653	secondary alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1990961	xenobiotic detoxification by transmembrane export across the plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:2000147	positive regulation of cell motility	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004839	Aminotransferase_I/II	85	454
IPR015424	PyrdxlP-dep_Trfase	54	458

External Links

No external refs found!

SOLTUB.AGRIA.G00000019249

Expression Profile

Co-expression Networks

Functional Annotation