SOLTUB.AGRIA.G00000019292


Description : Beclin 1 protein


Gene families : OG_02_0019789 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019292
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_57


Type GO Term Name Evidence Source
CC GO:0000407 phagophore assembly site IEA AHRD
BP GO:0000423 mitophagy IEA AHRD
BP GO:0001666 response to hypoxia IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005768 endosome IEA AHRD
CC GO:0005776 autophagosome IEA AHRD
CC GO:0005783 endoplasmic reticulum IEA AHRD
CC GO:0005802 trans-Golgi network IEA AHRD
CC GO:0005856 cytoskeleton IEA AHRD
BP GO:0006623 protein targeting to vacuole IEA AHRD
BP GO:0006995 cellular response to nitrogen starvation IEA AHRD
BP GO:0007568 aging IEA AHRD
BP GO:0008285 negative regulation of cell population proliferation IEA AHRD
BP GO:0009846 pollen germination IEA AHRD
BP GO:0010040 response to iron(II) ion IEA AHRD
BP GO:0010288 response to lead ion IEA AHRD
BP GO:0010613 positive regulation of cardiac muscle hypertrophy IEA AHRD
MF GO:0019901 protein kinase binding IEA AHRD
CC GO:0030425 dendrite IEA AHRD
BP GO:0030587 sorocarp development IEA AHRD
CC GO:0031090 organelle membrane IEA AHRD
MF GO:0031625 ubiquitin protein ligase binding IEA AHRD
BP GO:0032101 regulation of response to external stimulus IEA AHRD
BP GO:0032465 regulation of cytokinesis IEA AHRD
BP GO:0032801 receptor catabolic process IEA AHRD
BP GO:0033197 response to vitamin E IEA AHRD
BP GO:0034198 cellular response to amino acid starvation IEA AHRD
CC GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I IEA AHRD
CC GO:0034272 phosphatidylinositol 3-kinase complex, class III, type II IEA AHRD
BP GO:0042149 cellular response to glucose starvation IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0043066 negative regulation of apoptotic process IEA AHRD
MF GO:0043548 phosphatidylinositol 3-kinase binding IEA AHRD
BP GO:0043652 engulfment of apoptotic cell IEA AHRD
BP GO:0045022 early endosome to late endosome transport IEA AHRD
BP GO:0045324 late endosome to vacuole transport IEA AHRD
CC GO:0045335 phagocytic vesicle IEA AHRD
BP GO:0048513 animal organ development IEA AHRD
BP GO:0048585 negative regulation of response to stimulus IEA AHRD
BP GO:0048646 anatomical structure formation involved in morphogenesis IEA AHRD
BP GO:0048666 neuron development IEA AHRD
BP GO:0050435 amyloid-beta metabolic process IEA AHRD
BP GO:0050790 regulation of catalytic activity IEA AHRD
BP GO:0050832 defense response to fungus IEA AHRD
MF GO:0051020 GTPase binding IEA AHRD
BP GO:0070301 cellular response to hydrogen peroxide IEA AHRD
BP GO:0071275 cellular response to aluminum ion IEA AHRD
BP GO:0071280 cellular response to copper ion IEA AHRD
BP GO:0071364 cellular response to epidermal growth factor stimulus IEA AHRD
BP GO:0072359 circulatory system development IEA AHRD
BP GO:0098780 response to mitochondrial depolarisation IEA AHRD
BP GO:1902425 positive regulation of attachment of mitotic spindle microtubules to kinetochore IEA AHRD
BP GO:1902902 negative regulation of autophagosome assembly IEA AHRD
BP GO:1905672 negative regulation of lysosome organization IEA AHRD
BP GO:2000378 negative regulation of reactive oxygen species metabolic process IEA AHRD
BP GO:2000786 positive regulation of autophagosome assembly IEA AHRD
BP GO:2001244 positive regulation of intrinsic apoptotic signaling pathway IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000217 DNA secondary structure binding IEP Predict GO terms from Neighborhoods
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0001701 in utero embryonic development IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006376 mRNA splice site selection IEP Predict GO terms from Neighborhoods
BP GO:0006901 vesicle coating IEP Predict GO terms from Neighborhoods
BP GO:0007020 microtubule nucleation IEP Predict GO terms from Neighborhoods
BP GO:0007031 peroxisome organization IEP Predict GO terms from Neighborhoods
BP GO:0007063 regulation of sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
BP GO:0007549 dosage compensation IEP Predict GO terms from Neighborhoods
BP GO:0007623 circadian rhythm IEP Predict GO terms from Neighborhoods
MF GO:0008192 RNA guanylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009048 dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0009452 7-methylguanosine RNA capping IEP Predict GO terms from Neighborhoods
BP GO:0009704 de-etiolation IEP Predict GO terms from Neighborhoods
BP GO:0010363 regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
MF GO:0016417 S-acyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019707 protein-cysteine S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0022605 mammalian oogenesis stage IEP Predict GO terms from Neighborhoods
BP GO:0030177 positive regulation of Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030178 negative regulation of Wnt signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0031418 L-ascorbic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0031440 regulation of mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0032091 negative regulation of protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Predict GO terms from Neighborhoods
CC GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEP Predict GO terms from Neighborhoods
BP GO:0034052 positive regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0034067 protein localization to Golgi apparatus IEP Predict GO terms from Neighborhoods
MF GO:0034458 3'-5' RNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0034612 response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0036064 ciliary basal body IEP Predict GO terms from Neighborhoods
BP GO:0036260 RNA capping IEP Predict GO terms from Neighborhoods
MF GO:0043424 protein histidine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044380 protein localization to cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0044782 cilium organization IEP Predict GO terms from Neighborhoods
BP GO:0044788 modulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044794 positive regulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044827 modulation by host of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0044829 positive regulation by host of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0045664 regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045666 positive regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045786 negative regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045875 negative regulation of sister chromatid cohesion IEP Predict GO terms from Neighborhoods
MF GO:0048029 monosaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0048160 primary follicle stage IEP Predict GO terms from Neighborhoods
BP GO:0048208 COPII vesicle coating IEP Predict GO terms from Neighborhoods
MF GO:0048244 phytanoyl-CoA dioxygenase activity IEP Predict GO terms from Neighborhoods
CC GO:0048471 perinuclear region of cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0048511 rhythmic process IEP Predict GO terms from Neighborhoods
BP GO:0048599 oocyte development IEP Predict GO terms from Neighborhoods
BP GO:0048705 skeletal system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0051100 negative regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051270 obsolete regulation of cellular component movement IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051728 cell cycle switching, mitotic to meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051729 germline cell cycle switching, mitotic to meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051851 modulation by host of symbiont process IEP Predict GO terms from Neighborhoods
BP GO:0060184 cell cycle switching IEP Predict GO terms from Neighborhoods
BP GO:0060271 cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:0061512 protein localization to cilium IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
BP GO:0070555 response to interleukin-1 IEP Predict GO terms from Neighborhoods
MF GO:0070568 guanylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:0071539 protein localization to centrosome IEP Predict GO terms from Neighborhoods
BP GO:0072698 protein localization to microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0090395 plant cell papilla IEP Predict GO terms from Neighborhoods
CC GO:0090397 stigma papilla IEP Predict GO terms from Neighborhoods
BP GO:0110104 mRNA alternative polyadenylation IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:1900363 regulation of mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:1904338 regulation of dopaminergic neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:1904340 positive regulation of dopaminergic neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:1904956 regulation of midbrain dopaminergic neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:1904958 positive regulation of midbrain dopaminergic neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:1905424 regulation of Wnt-mediated midbrain dopaminergic neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:1905426 positive regulation of Wnt-mediated midbrain dopaminergic neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:1905508 protein localization to microtubule organizing center IEP Predict GO terms from Neighborhoods
BP GO:1905515 non-motile cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1990089 response to nerve growth factor IEP Predict GO terms from Neighborhoods
BP GO:1990090 cellular response to nerve growth factor stimulus IEP Predict GO terms from Neighborhoods
MF GO:1990247 N6-methyladenosine-containing RNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000050 regulation of non-canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000052 positive regulation of non-canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000243 positive regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000736 regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR040455 Atg6_BARA 309 484
IPR041691 Atg6/beclin_CC 178 306
No external refs found!