SOLTUB.AGRIA.G00000019378


Description : DUF641 family protein (DUF641)


Gene families : OG_02_0014929 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019378
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_184


Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA AHRD
MF GO:0000166 nucleotide binding IEA AHRD
CC GO:0000172 ribonuclease MRP complex IEA AHRD
MF GO:0000287 magnesium ion binding IEA AHRD
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEA AHRD
BP GO:0001172 RNA-templated transcription IEA AHRD
BP GO:0001682 tRNA 5'-leader removal IEA AHRD
MF GO:0003676 nucleic acid binding IEA AHRD
MF GO:0003677 DNA binding IEA AHRD
MF GO:0003678 DNA helicase activity IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0003723 RNA binding IEA AHRD
MF GO:0003724 RNA helicase activity IEA AHRD
MF GO:0003727 single-stranded RNA binding IEA AHRD
MF GO:0003735 structural constituent of ribosome IEA AHRD
MF GO:0003824 catalytic activity IEA AHRD
MF GO:0003896 DNA primase activity IEA AHRD
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA AHRD
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA AHRD
MF GO:0004129 cytochrome-c oxidase activity IEA AHRD
MF GO:0004170 dUTP diphosphatase activity IEA AHRD
MF GO:0004197 cysteine-type endopeptidase activity IEA AHRD
MF GO:0004314 [acyl-carrier-protein] S-malonyltransferase activity IEA AHRD
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA AHRD
MF GO:0004386 helicase activity IEA AHRD
MF GO:0004518 nuclease activity IEA AHRD
MF GO:0004519 endonuclease activity IEA AHRD
MF GO:0004527 exonuclease activity IEA AHRD
MF GO:0004532 exoribonuclease activity IEA AHRD
MF GO:0004559 alpha-mannosidase activity IEA AHRD
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA AHRD
MF GO:0004803 transposase activity IEA AHRD
MF GO:0004843 cysteine-type deubiquitinase activity IEA AHRD
MF GO:0004930 G protein-coupled receptor activity IEA AHRD
MF GO:0004984 olfactory receptor activity IEA AHRD
MF GO:0005198 structural molecule activity IEA AHRD
MF GO:0005216 ion channel activity IEA AHRD
MF GO:0005267 potassium channel activity IEA AHRD
MF GO:0005509 calcium ion binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005655 nucleolar ribonuclease P complex IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005743 mitochondrial inner membrane IEA AHRD
CC GO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEA AHRD
CC GO:0005840 ribosome IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0005975 carbohydrate metabolic process IEA AHRD
BP GO:0006013 mannose metabolic process IEA AHRD
BP GO:0006119 oxidative phosphorylation IEA AHRD
BP GO:0006226 dUMP biosynthetic process IEA AHRD
BP GO:0006259 DNA metabolic process IEA AHRD
BP GO:0006260 DNA replication IEA AHRD
BP GO:0006269 DNA replication, synthesis of RNA primer IEA AHRD
BP GO:0006310 DNA recombination IEA AHRD
BP GO:0006313 transposition, DNA-mediated IEA AHRD
BP GO:0006351 DNA-templated transcription IEA AHRD
BP GO:0006352 DNA-templated transcription initiation IEA AHRD
BP GO:0006355 regulation of DNA-templated transcription IEA AHRD
BP GO:0006357 regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0006412 translation IEA AHRD
BP GO:0006417 regulation of translation IEA AHRD
BP GO:0006491 N-glycan processing IEA AHRD
BP GO:0006508 proteolysis IEA AHRD
BP GO:0006517 protein deglycosylation IEA AHRD
BP GO:0006629 lipid metabolic process IEA AHRD
BP GO:0006631 fatty acid metabolic process IEA AHRD
BP GO:0006633 fatty acid biosynthetic process IEA AHRD
BP GO:0006811 ion transport IEA AHRD
BP GO:0006812 cation transport IEA AHRD
BP GO:0006813 potassium ion transport IEA AHRD
BP GO:0007165 signal transduction IEA AHRD
BP GO:0007186 G protein-coupled receptor signaling pathway IEA AHRD
BP GO:0007424 open tracheal system development IEA AHRD
BP GO:0007608 sensory perception of smell IEA AHRD
BP GO:0008033 tRNA processing IEA AHRD
BP GO:0008150 biological_process IEA AHRD
BP GO:0008152 metabolic process IEA AHRD
MF GO:0008168 methyltransferase activity IEA AHRD
MF GO:0008233 peptidase activity IEA AHRD
MF GO:0008234 cysteine-type peptidase activity IEA AHRD
MF GO:0008237 metallopeptidase activity IEA AHRD
MF GO:0008242 omega peptidase activity IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
MF GO:0008324 cation transmembrane transporter activity IEA AHRD
BP GO:0008362 chitin-based embryonic cuticle biosynthetic process IEA AHRD
BP GO:0008652 cellular amino acid biosynthetic process IEA AHRD
BP GO:0009060 aerobic respiration IEA AHRD
BP GO:0009086 methionine biosynthetic process IEA AHRD
BP GO:0009117 nucleotide metabolic process IEA AHRD
CC GO:0009523 photosystem II IEA AHRD
CC GO:0009535 chloroplast thylakoid membrane IEA AHRD
CC GO:0009579 thylakoid IEA AHRD
BP GO:0009639 response to red or far red light IEA AHRD
CC GO:0009654 photosystem II oxygen evolving complex IEA AHRD
BP GO:0009725 response to hormone IEA AHRD
BP GO:0009734 auxin-activated signaling pathway IEA AHRD
BP GO:0009959 negative gravitropism IEA AHRD
MF GO:0010333 terpene synthase activity IEA AHRD
BP GO:0010506 regulation of autophagy IEA AHRD
CC GO:0012505 endomembrane system IEA AHRD
BP GO:0015074 DNA integration IEA AHRD
BP GO:0015979 photosynthesis IEA AHRD
CC GO:0016020 membrane IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
BP GO:0016032 viral process IEA AHRD
BP GO:0016063 rhodopsin biosynthetic process IEA AHRD
BP GO:0016102 diterpenoid biosynthetic process IEA AHRD
MF GO:0016301 kinase activity IEA AHRD
BP GO:0016310 phosphorylation IEA AHRD
MF GO:0016419 S-malonyltransferase activity IEA AHRD
MF GO:0016491 oxidoreductase activity IEA AHRD
MF GO:0016740 transferase activity IEA AHRD
MF GO:0016746 acyltransferase activity IEA AHRD
MF GO:0016779 nucleotidyltransferase activity IEA AHRD
MF GO:0016787 hydrolase activity IEA AHRD
MF GO:0016788 hydrolase activity, acting on ester bonds IEA AHRD
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA AHRD
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEA AHRD
MF GO:0016829 lyase activity IEA AHRD
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEA AHRD
BP GO:0017000 antibiotic biosynthetic process IEA AHRD
MF GO:0017108 5'-flap endonuclease activity IEA AHRD
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEA AHRD
BP GO:0018144 RNA-protein covalent cross-linking IEA AHRD
CC GO:0019028 viral capsid IEA AHRD
CC GO:0019029 helical viral capsid IEA AHRD
CC GO:0019030 icosahedral viral capsid IEA AHRD
BP GO:0019062 virion attachment to host cell IEA AHRD
BP GO:0019068 virion assembly IEA AHRD
BP GO:0019073 viral DNA genome packaging IEA AHRD
BP GO:0019079 viral genome replication IEA AHRD
BP GO:0019082 viral protein processing IEA AHRD
BP GO:0019083 viral transcription IEA AHRD
BP GO:0019284 L-methionine salvage from S-adenosylmethionine IEA AHRD
BP GO:0019509 L-methionine salvage from methylthioadenosine IEA AHRD
CC GO:0019898 extrinsic component of membrane IEA AHRD
MF GO:0020037 heme binding IEA AHRD
BP GO:0022900 electron transport chain IEA AHRD
BP GO:0030001 metal ion transport IEA AHRD
MF GO:0030246 carbohydrate binding IEA AHRD
CC GO:0030430 host cell cytoplasm IEA AHRD
BP GO:0030431 sleep IEA AHRD
CC GO:0030659 cytoplasmic vesicle membrane IEA AHRD
CC GO:0030681 multimeric ribonuclease P complex IEA AHRD
MF GO:0031177 phosphopantetheine binding IEA AHRD
CC GO:0031225 anchored component of membrane IEA AHRD
BP GO:0032222 regulation of synaptic transmission, cholinergic IEA AHRD
BP GO:0032259 methylation IEA AHRD
BP GO:0032508 DNA duplex unwinding IEA AHRD
MF GO:0033204 ribonuclease P RNA binding IEA AHRD
BP GO:0033567 DNA replication, Okazaki fragment processing IEA AHRD
CC GO:0033644 host cell membrane IEA AHRD
BP GO:0034220 ion transmembrane transport IEA AHRD
BP GO:0035010 encapsulation of foreign target IEA AHRD
BP GO:0035152 regulation of tube architecture, open tracheal system IEA AHRD
BP GO:0035158 regulation of tube diameter, open tracheal system IEA AHRD
BP GO:0039502 suppression by virus of host type I interferon-mediated signaling pathway IEA AHRD
BP GO:0039503 suppression by virus of host innate immune response IEA AHRD
BP GO:0039520 induction by virus of host autophagy IEA AHRD
BP GO:0039525 modulation by virus of host chromatin organization IEA AHRD
BP GO:0039548 suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of IRF3 activity IEA AHRD
BP GO:0039579 suppression by virus of host ISG15-protein conjugation IEA AHRD
CC GO:0039618 T=pseudo3 icosahedral viral capsid IEA AHRD
BP GO:0039648 modulation by virus of host protein ubiquitination IEA AHRD
BP GO:0039693 viral DNA genome replication IEA AHRD
BP GO:0039694 viral RNA genome replication IEA AHRD
BP GO:0039695 DNA-templated viral transcription IEA AHRD
BP GO:0039707 pore formation by virus in membrane of host cell IEA AHRD
CC GO:0042025 host cell nucleus IEA AHRD
MF GO:0042302 structural constituent of cuticle IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
CC GO:0044161 host cell cytoplasmic vesicle IEA AHRD
CC GO:0044162 host cell cytoplasmic vesicle membrane IEA AHRD
CC GO:0044172 host cell endoplasmic reticulum-Golgi intermediate compartment IEA AHRD
CC GO:0044220 host cell perinuclear region of cytoplasm IEA AHRD
CC GO:0044385 integral to membrane of host cell IEA AHRD
BP GO:0044826 viral genome integration into host DNA IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0046081 dUTP catabolic process IEA AHRD
MF GO:0046570 methylthioribulose 1-phosphate dehydratase activity IEA AHRD
BP GO:0046718 viral entry into host cell IEA AHRD
BP GO:0046782 regulation of viral transcription IEA AHRD
CC GO:0046798 viral portal complex IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
MF GO:0046873 metal ion transmembrane transporter activity IEA AHRD
MF GO:0047507 (deoxy)nucleoside-phosphate kinase activity IEA AHRD
BP GO:0048511 rhythmic process IEA AHRD
BP GO:0050896 response to stimulus IEA AHRD
BP GO:0050911 detection of chemical stimulus involved in sensory perception of smell IEA AHRD
BP GO:0051259 protein complex oligomerization IEA AHRD
MF GO:0052767 mannosyl-oligosaccharide 1,6-alpha-mannosidase activity IEA AHRD
BP GO:0055085 transmembrane transport IEA AHRD
CC GO:0070469 respirasome IEA AHRD
BP GO:0071805 potassium ion transmembrane transport IEA AHRD
BP GO:0075509 endocytosis involved in viral entry into host cell IEA AHRD
BP GO:0075512 clathrin-dependent endocytosis of virus by host cell IEA AHRD
BP GO:0075713 establishment of integrated proviral latency IEA AHRD
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEA AHRD
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA AHRD
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA AHRD
BP GO:0098006 viral DNA genome packaging, headful IEA AHRD
BP GO:0098655 cation transmembrane transport IEA AHRD
BP GO:0099002 viral genome ejection through host cell envelope, short tail mechanism IEA AHRD
MF GO:0140603 obsolete ATP hydrolysis activity IEA AHRD
BP GO:1902600 proton transmembrane transport IEA AHRD
BP GO:1903818 positive regulation of voltage-gated potassium channel activity IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000741 karyogamy IEP Predict GO terms from Neighborhoods
MF GO:0001216 DNA-binding transcription activator activity IEP Predict GO terms from Neighborhoods
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
BP GO:0001525 angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001654 eye development IEP Predict GO terms from Neighborhoods
BP GO:0001742 oenocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001763 morphogenesis of a branching structure IEP Predict GO terms from Neighborhoods
BP GO:0001775 cell activation IEP Predict GO terms from Neighborhoods
BP GO:0002521 leukocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0003785 actin monomer binding IEP Predict GO terms from Neighborhoods
BP GO:0006997 nucleus organization IEP Predict GO terms from Neighborhoods
BP GO:0007379 segment specification IEP Predict GO terms from Neighborhoods
BP GO:0007380 specification of segmental identity, head IEP Predict GO terms from Neighborhoods
BP GO:0007420 brain development IEP Predict GO terms from Neighborhoods
BP GO:0007422 peripheral nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0007423 sensory organ development IEP Predict GO terms from Neighborhoods
BP GO:0007476 imaginal disc-derived wing morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0007480 imaginal disc-derived leg morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009554 megasporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009556 microsporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009640 photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009708 benzyl isoquinoline alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009886 post-embryonic animal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009954 proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010076 maintenance of floral meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010077 maintenance of inflorescence meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010154 fruit development IEP Predict GO terms from Neighborhoods
BP GO:0010197 polar nucleus fusion IEP Predict GO terms from Neighborhoods
BP GO:0010201 response to continuous far red light stimulus by the high-irradiance response system IEP Predict GO terms from Neighborhoods
BP GO:0010218 response to far red light IEP Predict GO terms from Neighborhoods
BP GO:0010223 secondary shoot formation IEP Predict GO terms from Neighborhoods
BP GO:0010227 floral organ abscission IEP Predict GO terms from Neighborhoods
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Predict GO terms from Neighborhoods
BP GO:0010229 inflorescence development IEP Predict GO terms from Neighborhoods
BP GO:0010321 regulation of vegetative phase change IEP Predict GO terms from Neighborhoods
BP GO:0010346 shoot axis formation IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010371 regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010453 regulation of cell fate commitment IEP Predict GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0015630 microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0016098 monoterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016099 monoterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019747 regulation of isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030098 lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030099 myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030217 T cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030218 erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0032350 regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032351 negative regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033075 isoquinoline alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033076 isoquinoline alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035107 appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035114 imaginal disc-derived appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035120 post-embryonic appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035295 tube development IEP Predict GO terms from Neighborhoods
BP GO:0040034 regulation of development, heterochronic IEP Predict GO terms from Neighborhoods
BP GO:0042110 T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0042659 regulation of cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0043010 camera-type eye development IEP Predict GO terms from Neighborhoods
CC GO:0045171 intercellular bridge IEP Predict GO terms from Neighborhoods
BP GO:0045321 leukocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0045664 regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0046445 benzyl isoquinoline alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046649 lymphocyte activation IEP Predict GO terms from Neighborhoods
BP GO:0048236 plant-type sporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048363 mucilage pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048367 shoot system development IEP Predict GO terms from Neighborhoods
BP GO:0048457 floral whorl morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048469 cell maturation IEP Predict GO terms from Neighborhoods
BP GO:0048506 regulation of timing of meristematic phase transition IEP Predict GO terms from Neighborhoods
BP GO:0048509 regulation of meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Predict GO terms from Neighborhoods
BP GO:0048532 anatomical structure arrangement IEP Predict GO terms from Neighborhoods
BP GO:0048608 reproductive structure development IEP Predict GO terms from Neighborhoods
BP GO:0048735 haltere morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048764 trichoblast maturation IEP Predict GO terms from Neighborhoods
BP GO:0048765 root hair cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048859 formation of anatomical boundary IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
MF GO:0050593 N-methylcoclaurine 3'-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0051015 actin filament binding IEP Predict GO terms from Neighborhoods
BP GO:0060323 head morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060429 epithelium development IEP Predict GO terms from Neighborhoods
BP GO:0061326 renal tubule development IEP Predict GO terms from Neighborhoods
BP GO:0072002 Malpighian tubule development IEP Predict GO terms from Neighborhoods
BP GO:0080006 internode patterning IEP Predict GO terms from Neighborhoods
BP GO:0090354 regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090356 negative regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090470 shoot organ boundary specification IEP Predict GO terms from Neighborhoods
BP GO:0090567 reproductive shoot system development IEP Predict GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Predict GO terms from Neighborhoods
BP GO:0090691 formation of plant organ boundary IEP Predict GO terms from Neighborhoods
BP GO:1901010 (S)-reticuline metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901012 (S)-reticuline biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903131 mononuclear cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1905428 regulation of plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:2000025 regulation of leaf formation IEP Predict GO terms from Neighborhoods
BP GO:2000495 regulation of cell proliferation involved in compound eye morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000497 positive regulation of cell proliferation involved in compound eye morphogenesis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006943 DUF641_pln 82 211
No external refs found!