SOLTUB.AGRIA.G00000019649

Description : Ferritin

Gene families : OG_02_0009260 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019649
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_68

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
BP	GO:0000302	response to reactive oxygen species	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004322	ferroxidase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006826	iron ion transport	IEA	AHRD
BP	GO:0006880	intracellular sequestering of iron ion	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008198	ferrous iron binding	IEA	AHRD
MF	GO:0008199	ferric iron binding	IEA	AHRD
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IEA	AHRD
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009908	flower development	IEA	AHRD
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010039	response to iron ion	IEA	AHRD
BP	GO:0010043	response to zinc ion	IEA	AHRD
BP	GO:0015979	photosynthesis	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016722	oxidoreductase activity, acting on metal ions	None	Extended
MF	GO:0016724	oxidoreductase activity, acting on metal ions, oxygen as acceptor	None	Extended
MF	GO:0019904	protein domain specific binding	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042542	response to hydrogen peroxide	IEA	AHRD
CC	GO:0042651	thylakoid membrane	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048366	leaf development	IEA	AHRD
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051235	maintenance of location	None	Extended
BP	GO:0051238	sequestering of metal ion	None	Extended
BP	GO:0051651	maintenance of location in cell	None	Extended
BP	GO:0051707	response to other organism	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0097577	sequestering of iron ion	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000494	box C/D RNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0000932	P-body	IEP	Predict GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003727	single-stranded RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	IEP	Predict GO terms from Neighborhoods
CC	GO:0005844	polysome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007276	gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007283	spermatogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0008033	tRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0008187	poly-pyrimidine tract binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008266	poly(U) RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008283	cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0008334	histone mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009606	tropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009629	response to gravity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009630	gravitropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009898	cytoplasmic side of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009958	positive gravitropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0010286	heat acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010827	regulation of glucose transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016073	snRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016074	sno(s)RNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0017069	snRNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0017070	U6 snRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0019898	extrinsic component of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031126	sno(s)RNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031965	nuclear membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031981	nuclear lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0032879	regulation of localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032897	negative regulation of viral transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0033500	carbohydrate homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0033967	box C/D RNA metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0034046	poly(G) binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034963	box C/D RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0035265	organ growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0035561	regulation of chromatin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035562	negative regulation of chromatin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0035770	ribonucleoprotein granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0036093	germ cell proliferation	IEP	Predict GO terms from Neighborhoods
CC	GO:0036464	cytoplasmic ribonucleoprotein granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0040031	snRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0042593	glucose homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0043144	sno(s)RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043414	macromolecule methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043484	regulation of RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043628	small regulatory ncRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0045257	succinate dehydrogenase complex (ubiquinone)	IEP	Predict GO terms from Neighborhoods
CC	GO:0045281	succinate dehydrogenase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0045283	fumarate reductase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0045787	positive regulation of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045892	negative regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045931	positive regulation of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046324	regulation of glucose import	IEP	Predict GO terms from Neighborhoods
MF	GO:0046625	sphingolipid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0046782	regulation of viral transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0048024	regulation of mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0048232	male gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048525	negative regulation of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050684	regulation of mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0050792	regulation of viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051098	regulation of binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051100	negative regulation of binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051117	ATPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0070717	poly-purine tract binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090068	positive regulation of cell cycle process	IEP	Predict GO terms from Neighborhoods
MF	GO:0097001	ceramide binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0098552	side of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098562	cytoplasmic side of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0106349	snRNA methylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0120114	Sm-like protein family complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0120259	7SK snRNP	IEP	Predict GO terms from Neighborhoods
BP	GO:1900087	positive regulation of G1/S transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1901989	positive regulation of cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1901992	positive regulation of mitotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902806	regulation of cell cycle G1/S phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902808	positive regulation of cell cycle G1/S phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1903311	regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
CC	GO:1990204	oxidoreductase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1990437	snRNA 2'-O-methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1990438	U6 2'-O-snRNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000045	regulation of G1/S transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR009078	Ferritin-like_SF	78	251
IPR008331	Ferritin_DPS_dom	93	237

External Links

No external refs found!

SOLTUB.AGRIA.G00000019649

Expression Profile

Co-expression Networks

Functional Annotation