SOLTUB.AGRIA.G00000019693

Description : DA1

Gene families : OG_02_0009264 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019693
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_186

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0006508	proteolysis	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	IEA	AHRD
BP	GO:0008285	negative regulation of cell population proliferation	IEA	AHRD
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010088	phloem development	IEA	AHRD
BP	GO:0010564	regulation of cell cycle process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
MF	GO:0032182	ubiquitin-like protein binding	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032875	regulation of DNA endoreduplication	IEA	AHRD
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042127	regulation of cell population proliferation	None	Extended
MF	GO:0043130	ubiquitin binding	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045926	negative regulation of growth	None	Extended
BP	GO:0046620	regulation of organ growth	None	Extended
BP	GO:0046621	negative regulation of organ growth	IEA	AHRD
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0048317	seed morphogenesis	IEA	AHRD
BP	GO:0048364	root development	IEA	AHRD
BP	GO:0048482	plant ovule morphogenesis	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048640	negative regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080113	regulation of seed growth	IEA	AHRD
BP	GO:0090329	regulation of DNA-templated DNA replication	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1900055	regulation of leaf senescence	None	Extended
BP	GO:1900057	positive regulation of leaf senescence	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	IEP	Predict GO terms from Neighborhoods
CC	GO:0000325	plant-type vacuole	IEP	Predict GO terms from Neighborhoods
MF	GO:0000976	transcription cis-regulatory region binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0003013	circulatory system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003018	vascular process in circulatory system	IEP	Predict GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003690	double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005432	calcium:sodium antiporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005536	glucose binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0005537	mannose binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0005986	sucrose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007154	cell communication	IEP	Predict GO terms from Neighborhoods
BP	GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	IEP	Predict GO terms from Neighborhoods
BP	GO:0007623	circadian rhythm	IEP	Predict GO terms from Neighborhoods
BP	GO:0007639	homeostasis of number of meristem cells	IEP	Predict GO terms from Neighborhoods
BP	GO:0009267	cellular response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009408	response to heat	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009566	fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Predict GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009625	response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:0009642	response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009644	response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009651	response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0009720	detection of hormone stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009726	detection of endogenous stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009729	detection of brassinosteroid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009753	response to jasmonic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009838	abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009991	response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0010017	red or far-red light signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010052	guard cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010067	procambium histogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010075	regulation of meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010080	regulation of floral meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010089	xylem development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010098	suspensor development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010208	pollen wall assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010227	floral organ abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0010232	vascular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010233	phloem transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010262	somatic embryogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010286	heat acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010372	positive regulation of gibberellin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010628	positive regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0015026	coreceptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015334	high-affinity oligopeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015368	calcium:cation antiporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016036	cellular response to phosphate starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016157	sucrose synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016925	protein sumoylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0019862	IgA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019865	immunoglobulin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022607	cellular component assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030247	polysaccharide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031435	mitogen-activated protein kinase kinase kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031647	regulation of protein stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0031667	response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0031668	cellular response to extracellular stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0031669	cellular response to nutrient levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0032260	response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0033554	cellular response to stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035519	protein K29-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0039020	pronephric nephron tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0040015	negative regulation of multicellular organism growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0042542	response to hydrogen peroxide	IEP	Predict GO terms from Neighborhoods
BP	GO:0042592	homeostatic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042594	response to starvation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043162	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0043394	proteoglycan binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043455	regulation of secondary metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043621	protein self-association	IEP	Predict GO terms from Neighborhoods
BP	GO:0044314	protein K27-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0045471	response to ethanol	IEP	Predict GO terms from Neighborhoods
BP	GO:0045787	positive regulation of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0045840	positive regulation of mitotic nuclear division	IEP	Predict GO terms from Neighborhoods
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046524	sucrose-phosphate synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046685	response to arsenic-containing substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0046688	response to copper ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0048511	rhythmic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048522	positive regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048578	positive regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048832	specification of plant organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048833	specification of floral organ number	IEP	Predict GO terms from Neighborhoods
BP	GO:0048873	homeostasis of number of cells within a tissue	IEP	Predict GO terms from Neighborhoods
BP	GO:0048878	chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050801	ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0050839	cell adhesion molecule binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051259	protein complex oligomerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0055063	sulfate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055073	cadmium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055081	anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060866	leaf abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0061326	renal tubule development	IEP	Predict GO terms from Neighborhoods
MF	GO:0061631	ubiquitin conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061650	ubiquitin-like protein conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061687	detoxification of inorganic compound	IEP	Predict GO terms from Neighborhoods
MF	GO:0061809	NAD+ nucleotidase, cyclic ADP-ribose generating	IEP	Predict GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
MF	GO:0070492	oligosaccharide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070542	response to fatty acid	IEP	Predict GO terms from Neighborhoods
MF	GO:0070628	proteasome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070979	protein K11-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0071214	cellular response to abiotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071229	cellular response to acid chemical	IEP	Predict GO terms from Neighborhoods
BP	GO:0071462	cellular response to water stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071478	cellular response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071482	cellular response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071484	cellular response to light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071486	cellular response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071489	cellular response to red or far red light	IEP	Predict GO terms from Neighborhoods
BP	GO:0071496	cellular response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071585	detoxification of cadmium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071629	cytoplasm protein quality control by the ubiquitin-proteasome system	IEP	Predict GO terms from Neighborhoods
BP	GO:0071836	nectar secretion	IEP	Predict GO terms from Neighborhoods
MF	GO:0071916	dipeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072009	nephron epithelium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072073	kidney epithelium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072080	nephron tubule development	IEP	Predict GO terms from Neighborhoods
BP	GO:0072344	rescue of stalled ribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072507	divalent inorganic cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0072671	mitochondria-associated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0080054	low-affinity nitrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0085020	protein K6-linked ubiquitination	IEP	Predict GO terms from Neighborhoods
BP	GO:0090057	root radial pattern formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090408	phloem nitrate loading	IEP	Predict GO terms from Neighborhoods
MF	GO:0090448	glucosinolate:proton symporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090449	phloem glucosinolate loading	IEP	Predict GO terms from Neighborhoods
BP	GO:0098609	cell-cell adhesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0098742	cell-cell adhesion via plasma-membrane adhesion molecules	IEP	Predict GO terms from Neighborhoods
BP	GO:0098771	inorganic ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0104004	cellular response to environmental stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0140455	cytoplasm protein quality control	IEP	Predict GO terms from Neighborhoods
BP	GO:1901349	glucosinolate transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1901700	response to oxygen-containing compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1902347	response to strigolactone	IEP	Predict GO terms from Neighborhoods
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	Predict GO terms from Neighborhoods
BP	GO:1990116	ribosome-associated ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR022087	DA1-like_dom	290	499
IPR001781	Znf_LIM	141	179

External Links

No external refs found!

SOLTUB.AGRIA.G00000019693

Expression Profile

Co-expression Networks

Functional Annotation