SOLTUB.AGRIA.G00000019910

Description : two-component response regulator

Gene families : OG_02_0004637 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019910
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_262

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEA	AHRD
BP	GO:0000160	phosphorelay signal transduction system	None	Extended
MF	GO:0000976	transcription cis-regulatory region binding	IEA	AHRD
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	IEA	AHRD
BP	GO:0009873	ethylene-activated signaling pathway	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010074	maintenance of meristem identity	None	Extended
BP	GO:0010075	regulation of meristem growth	None	Extended
BP	GO:0010082	regulation of root meristem growth	IEA	AHRD
BP	GO:0010119	regulation of stomatal movement	IEA	AHRD
BP	GO:0010150	leaf senescence	IEA	AHRD
BP	GO:0010380	regulation of chlorophyll biosynthetic process	IEA	AHRD
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010492	maintenance of shoot apical meristem identity	IEA	AHRD
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019827	stem cell population maintenance	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031537	regulation of anthocyanin metabolic process	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048576	positive regulation of short-day photoperiodism, flowering	IEA	AHRD
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048582	positive regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048587	regulation of short-day photoperiodism, flowering	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080022	primary root development	IEA	AHRD
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEA	AHRD
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080113	regulation of seed growth	IEA	AHRD
BP	GO:0090056	regulation of chlorophyll metabolic process	None	Extended
BP	GO:0090506	axillary shoot meristem initiation	IEA	AHRD
BP	GO:0090693	plant organ senescence	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901401	regulation of tetrapyrrole metabolic process	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901463	regulation of tetrapyrrole biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended
BP	GO:1990110	callus formation	IEA	AHRD
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended
BP	GO:2000022	regulation of jasmonic acid mediated signaling pathway	IEA	AHRD
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000028	regulation of photoperiodism, flowering	None	Extended
BP	GO:2000031	regulation of salicylic acid mediated signaling pathway	IEA	AHRD
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000243	positive regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000331	contractile vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0001910	regulation of leukocyte mediated cytotoxicity	IEP	Predict GO terms from Neighborhoods
BP	GO:0001912	positive regulation of leukocyte mediated cytotoxicity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002064	epithelial cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002697	regulation of immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002699	positive regulation of immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002703	regulation of leukocyte mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002705	positive regulation of leukocyte mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002706	regulation of lymphocyte mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002708	positive regulation of lymphocyte mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002715	regulation of natural killer cell mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002717	positive regulation of natural killer cell mediated immunity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005765	lysosomal membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006884	cell volume homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006895	Golgi to endosome transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006897	endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006898	receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006971	hypotonic response	IEP	Predict GO terms from Neighborhoods
CC	GO:0008021	synaptic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0008356	asymmetric cell division	IEP	Predict GO terms from Neighborhoods
BP	GO:0008361	regulation of cell size	IEP	Predict GO terms from Neighborhoods
BP	GO:0009648	photoperiodism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009911	positive regulation of flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009992	cellular water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010324	membrane invagination	IEP	Predict GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019900	kinase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019901	protein kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030100	regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030121	AP-1 adaptor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030122	AP-2 adaptor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030131	clathrin adaptor complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030133	transport vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0030276	clathrin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030667	secretory granule membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030707	ovarian follicle cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031341	regulation of cell killing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031343	positive regulation of cell killing	IEP	Predict GO terms from Neighborhoods
CC	GO:0031410	cytoplasmic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0031623	receptor internalization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031982	vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0032433	filopodium tip	IEP	Predict GO terms from Neighborhoods
BP	GO:0032506	cytokinetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Predict GO terms from Neighborhoods
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032885	regulation of polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033059	cellular pigmentation	IEP	Predict GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0035615	clathrin adaptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0036020	endolysosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0036090	cleavage furrow ingression	IEP	Predict GO terms from Neighborhoods
BP	GO:0042269	regulation of natural killer cell mediated cytotoxicity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043424	protein histidine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043473	pigmentation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045807	positive regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045912	negative regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045954	positive regulation of natural killer cell mediated cytotoxicity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048268	clathrin coat assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0048488	synaptic vesicle endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048489	synaptic vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048573	photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0051648	vesicle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051650	establishment of vesicle localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0060090	molecular adaptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0070382	exocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0072583	clathrin-dependent endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Predict GO terms from Neighborhoods
BP	GO:0097479	synaptic vesicle localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0097708	intracellular vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0097718	disordered domain specific binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0098797	plasma membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098852	lytic vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0099003	vesicle-mediated transport in synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0099024	plasma membrane invagination	IEP	Predict GO terms from Neighborhoods
CC	GO:0099503	secretory vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0101003	ficolin-1-rich granule membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0140238	presynaptic endocytosis	IEP	Predict GO terms from Neighborhoods
MF	GO:0140312	cargo adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900125	regulation of hyaluronan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900126	negative regulation of hyaluronan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902410	mitotic cytokinetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1990386	mitotic cleavage furrow ingression	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR009057	Homeobox-like_sf	216	276
IPR006447	Myb_dom_plants	219	272
IPR011006	CheY-like_superfamily	36	159
IPR001005	SANT/Myb	221	271
IPR001789	Sig_transdc_resp-reg_receiver	39	147

External Links

No external refs found!

SOLTUB.AGRIA.G00000019910

Expression Profile

Co-expression Networks

Functional Annotation