SOLTUB.AGRIA.G00000019992

Description : Ring finger protein, putative

Gene families : OG_02_0025938 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000019992
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_154

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010200	response to chitin	IEA	AHRD
BP	GO:0010243	response to organonitrogen compound	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0016567	protein ubiquitination	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043562	cellular response to nitrogen levels	IEA	AHRD
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0000281	mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0000287	magnesium ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000910	cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0001654	eye development	IEP	Predict GO terms from Neighborhoods
CC	GO:0001891	phagocytic cup	IEP	Predict GO terms from Neighborhoods
MF	GO:0003779	actin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004708	MAP kinase kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004709	MAP kinase kinase kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005819	spindle	IEP	Predict GO terms from Neighborhoods
CC	GO:0005938	cell cortex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006897	endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006907	pinocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0006915	apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0007059	chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007163	establishment or maintenance of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0007423	sensory organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009631	cold acclimation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010075	regulation of meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010082	regulation of root meristem growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0010965	regulation of mitotic sister chromatid separation	IEP	Predict GO terms from Neighborhoods
MF	GO:0016905	myosin heavy chain kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022604	regulation of cell morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030111	regulation of Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030178	negative regulation of Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030242	autophagy of peroxisome	IEP	Predict GO terms from Neighborhoods
BP	GO:0031152	aggregation involved in sorocarp development	IEP	Predict GO terms from Neighborhoods
CC	GO:0031252	cell leading edge	IEP	Predict GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031647	regulation of protein stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0032092	positive regulation of protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032781	positive regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033044	regulation of chromosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0033045	regulation of sister chromatid segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033047	regulation of mitotic sister chromatid segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035329	hippo signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0043010	camera-type eye development	IEP	Predict GO terms from Neighborhoods
BP	GO:0043200	response to amino acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043393	regulation of protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043462	regulation of ATP-dependent activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045132	meiotic chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045597	positive regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045787	positive regulation of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0048235	pollen sperm cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050764	regulation of phagocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050766	positive regulation of phagocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051015	actin filament binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051050	positive regulation of transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051090	regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051091	positive regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051098	regulation of binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051099	positive regulation of binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051510	regulation of unidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0051983	regulation of chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060237	regulation of fungal-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0060828	regulation of canonical Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0061640	cytoskeleton-dependent cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predict GO terms from Neighborhoods
BP	GO:0090068	positive regulation of cell cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090090	negative regulation of canonical Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090333	regulation of stomatal closure	IEP	Predict GO terms from Neighborhoods
CC	GO:0098687	chromosomal region	IEP	Predict GO terms from Neighborhoods
BP	GO:0098813	nuclear chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0099120	socially cooperative development	IEP	Predict GO terms from Neighborhoods
BP	GO:1900055	regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1900057	positive regulation of leaf senescence	IEP	Predict GO terms from Neighborhoods
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Predict GO terms from Neighborhoods
BP	GO:1902065	response to L-glutamate	IEP	Predict GO terms from Neighborhoods
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902456	regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1902457	negative regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1902463	protein localization to cell leading edge	IEP	Predict GO terms from Neighborhoods
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1905818	regulation of chromosome separation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000038	regulation of stomatal complex development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	110	136

External Links

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SOLTUB.AGRIA.G00000019992

Expression Profile

Co-expression Networks

Functional Annotation