SOLTUB.AGRIA.G00000020354

Description : Hcr2-2A

Gene families : OG_02_0000031 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020354
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_26

Type	GO Term	Name	Evidence	Source
BP	GO:0002238	response to molecule of fungal origin	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0016301	kinase activity	IEA	AHRD
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
BP	GO:0032501	multicellular organismal process	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0048856	anatomical structure development	IEA	AHRD
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005788	endoplasmic reticulum lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006244	pyrimidine nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006253	dCTP catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008131	primary amine oxidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009147	pyrimidine nucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009149	pyrimidine nucleoside triphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009166	nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009211	pyrimidine deoxyribonucleoside triphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009213	pyrimidine deoxyribonucleoside triphosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009219	pyrimidine deoxyribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009223	pyrimidine deoxyribonucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009264	deoxyribonucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009394	2'-deoxyribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009627	systemic acquired resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009690	cytokinin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009823	cytokinin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010103	stomatal complex morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010229	inflorescence development	IEP	Predict GO terms from Neighborhoods
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0019103	pyrimidine nucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019692	deoxyribose phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0032552	deoxyribonucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032556	pyrimidine deoxyribonucleotide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042262	DNA protection	IEP	Predict GO terms from Neighborhoods
BP	GO:0042447	hormone catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046065	dCTP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046386	deoxyribose phosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0047429	nucleoside triphosphate diphosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047840	dCTP diphosphatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048507	meristem development	IEP	Predict GO terms from Neighborhoods
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0071949	FAD binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072529	pyrimidine-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090626	plant epidermis morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	408	467
IPR001611	Leu-rich_rpt	213	251
IPR001611	Leu-rich_rpt	621	678
IPR001611	Leu-rich_rpt	264	286
IPR001611	Leu-rich_rpt	480	502
IPR013210	LRR_N_plant-typ	29	67

External Links

No external refs found!

SOLTUB.AGRIA.G00000020354

Expression Profile

Co-expression Networks

Functional Annotation