SOLTUB.AGRIA.G00000020448

Description : Peroxisomal membrane 13-like protein

Gene families : OG_02_0001610 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020448
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_134

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005778	peroxisomal membrane	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006635	fatty acid beta-oxidation	IEA	AHRD
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0016560	protein import into peroxisome matrix, docking	IEA	AHRD
BP	GO:0019395	fatty acid oxidation	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030258	lipid modification	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031903	microbody membrane	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0034440	lipid oxidation	None	Extended
CC	GO:0042579	microbody	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
CC	GO:1990351	transporter complex	None	Extended
CC	GO:1990429	peroxisomal importomer complex	IEA	AHRD

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000109	nucleotide-excision repair complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000117	regulation of transcription involved in G2/M transition of mitotic cell cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0000715	nucleotide-excision repair, DNA damage recognition	IEP	Predict GO terms from Neighborhoods
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003684	damaged DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003697	single-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005654	nucleoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005770	late endosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005771	multivesicular body	IEP	Predict GO terms from Neighborhoods
BP	GO:0006338	chromatin remodeling	IEP	Predict GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007276	gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007283	spermatogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0008022	protein C-terminus binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0010008	endosome membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0012506	vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0015935	small ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0016032	viral process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016197	endosomal transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016587	Isw1 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Predict GO terms from Neighborhoods
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	Predict GO terms from Neighborhoods
CC	GO:0030139	endocytic vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030659	cytoplasmic vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031010	ISWI-type complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031410	cytoplasmic vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0031593	polyubiquitin modification-dependent protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031982	vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0032182	ubiquitin-like protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032386	regulation of intracellular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032511	late endosome to vacuole transport via multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0034097	response to cytokine	IEP	Predict GO terms from Neighborhoods
BP	GO:0042176	regulation of protein catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043130	ubiquitin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0044391	ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0045324	late endosome to vacuole transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0046755	viral budding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048232	male gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048568	embryonic organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048609	multicellular organismal reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060962	regulation of ribosomal protein gene transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0060963	positive regulation of ribosomal protein gene transcription by RNA polymerase II	IEP	Predict GO terms from Neighborhoods
BP	GO:0061136	regulation of proteasomal protein catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0070628	proteasome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071345	cellular response to cytokine stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0071942	XPC complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0071985	multivesicular body sorting pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0080001	mucilage extrusion from seed coat	IEP	Predict GO terms from Neighborhoods
BP	GO:0080086	stamen filament development	IEP	Predict GO terms from Neighborhoods
CC	GO:0097708	intracellular vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0098760	response to interleukin-7	IEP	Predict GO terms from Neighborhoods
BP	GO:0098761	cellular response to interleukin-7	IEP	Predict GO terms from Neighborhoods
MF	GO:0140030	modification-dependent protein binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0140513	nuclear protein-containing complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1900426	positive regulation of defense response to bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:1903050	regulation of proteolysis involved in protein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903335	regulation of vacuolar transport	IEP	Predict GO terms from Neighborhoods
CC	GO:1904949	ATPase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	IEP	Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

External Links

No external refs found!

SOLTUB.AGRIA.G00000020448

Expression Profile

Co-expression Networks

Functional Annotation