Coexpression cluster: Cluster_134 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032991 protein-containing complex 41.33% (31/75) 1.74 0.0 1e-06
GO:0140513 nuclear protein-containing complex 22.67% (17/75) 2.57 0.0 2e-06
GO:0044089 positive regulation of cellular component biogenesis 10.67% (8/75) 3.84 0.0 5.6e-05
GO:1902494 catalytic complex 21.33% (16/75) 2.13 1e-06 0.000229
GO:0031595 nuclear proteasome complex 4.0% (3/75) 7.29 1e-06 0.000239
GO:1905368 peptidase complex 6.67% (5/75) 4.92 1e-06 0.000249
GO:0035770 ribonucleoprotein granule 10.67% (8/75) 3.36 1e-06 0.000254
GO:0036464 cytoplasmic ribonucleoprotein granule 10.67% (8/75) 3.39 1e-06 0.000259
GO:0005515 protein binding 65.33% (49/75) 0.79 1e-06 0.00026
GO:0051091 positive regulation of DNA-binding transcription factor activity 6.67% (5/75) 4.5 3e-06 0.000438
GO:0017025 TBP-class protein binding 5.33% (4/75) 5.35 3e-06 0.000471
GO:0051246 regulation of protein metabolic process 21.33% (16/75) 1.94 3e-06 0.000506
GO:0043922 negative regulation by host of viral transcription 4.0% (3/75) 6.52 5e-06 0.000536
GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway 5.33% (4/75) 5.17 5e-06 0.000544
GO:0048522 positive regulation of cellular process 34.67% (26/75) 1.33 4e-06 0.00055
GO:0045840 positive regulation of mitotic nuclear division 5.33% (4/75) 5.22 4e-06 0.000582
GO:1901992 positive regulation of mitotic cell cycle phase transition 6.67% (5/75) 4.28 6e-06 0.000654
GO:0080090 regulation of primary metabolic process 36.0% (27/75) 1.21 1.1e-05 0.000779
GO:0051171 regulation of nitrogen compound metabolic process 34.67% (26/75) 1.25 1.1e-05 0.000783
GO:0003676 nucleic acid binding 34.67% (26/75) 1.25 1.1e-05 0.000808
GO:0010468 regulation of gene expression 32.0% (24/75) 1.32 1.2e-05 0.000819
GO:0090575 RNA polymerase II transcription regulator complex 6.67% (5/75) 4.12 1.1e-05 0.000836
GO:0032509 endosome transport via multivesicular body sorting pathway 5.33% (4/75) 4.9 1e-05 0.000841
GO:0071985 multivesicular body sorting pathway 5.33% (4/75) 4.9 1e-05 0.000841
GO:0003727 single-stranded RNA binding 8.0% (6/75) 3.63 1e-05 0.000853
GO:0010638 positive regulation of organelle organization 9.33% (7/75) 3.26 9e-06 0.000862
GO:0010604 positive regulation of macromolecule metabolic process 25.33% (19/75) 1.6 1e-05 0.000893
GO:0000932 P-body 6.67% (5/75) 4.0 1.6e-05 0.000898
GO:0044087 regulation of cellular component biogenesis 12.0% (9/75) 2.62 1.6e-05 0.000914
GO:0090068 positive regulation of cell cycle process 8.0% (6/75) 3.52 1.4e-05 0.000918
GO:1901989 positive regulation of cell cycle phase transition 6.67% (5/75) 4.02 1.5e-05 0.000933
GO:0060255 regulation of macromolecule metabolic process 36.0% (27/75) 1.19 1.6e-05 0.000938
GO:0043228 non-membrane-bounded organelle 25.33% (19/75) 1.52 2e-05 0.000949
GO:0043232 intracellular non-membrane-bounded organelle 25.33% (19/75) 1.52 2e-05 0.000949
GO:0045944 positive regulation of transcription by RNA polymerase II 10.67% (8/75) 2.79 2.1e-05 0.00095
GO:0045931 positive regulation of mitotic cell cycle 6.67% (5/75) 3.95 1.9e-05 0.00095
GO:0140296 general transcription initiation factor binding 5.33% (4/75) 4.7 1.8e-05 0.000953
GO:1990429 peroxisomal importomer complex 2.67% (2/75) 8.03 2.2e-05 0.000966
GO:0051785 positive regulation of nuclear division 5.33% (4/75) 4.69 1.9e-05 0.000972
GO:0034515 proteasome storage granule 4.0% (3/75) 5.86 1.9e-05 0.000975
GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 4.0% (3/75) 5.75 2.4e-05 0.001037
GO:0010556 regulation of macromolecule biosynthetic process 28.0% (21/75) 1.39 2.5e-05 0.001066
GO:0043966 histone H3 acetylation 5.33% (4/75) 4.57 2.6e-05 0.001066
GO:0048518 positive regulation of biological process 37.33% (28/75) 1.11 2.7e-05 0.00111
GO:0045324 late endosome to vacuole transport 5.33% (4/75) 4.5 3.1e-05 0.001214
GO:0031531 thyrotropin-releasing hormone receptor binding 2.67% (2/75) 7.7 3.6e-05 0.001261
GO:0099576 regulation of protein catabolic process at postsynapse, modulating synaptic transmission 2.67% (2/75) 7.7 3.6e-05 0.001261
GO:0016560 protein import into peroxisome matrix, docking 2.67% (2/75) 7.7 3.6e-05 0.001261
GO:0010640 regulation of platelet-derived growth factor receptor signaling pathway 2.67% (2/75) 7.7 3.6e-05 0.001261
GO:0010642 negative regulation of platelet-derived growth factor receptor signaling pathway 2.67% (2/75) 7.7 3.6e-05 0.001261
GO:0008285 negative regulation of cell population proliferation 8.0% (6/75) 3.28 3.8e-05 0.001271
GO:0070717 poly-purine tract binding 5.33% (4/75) 4.43 3.8e-05 0.001293
GO:0005488 binding 73.33% (55/75) 0.55 3.3e-05 0.001293
GO:0005667 transcription regulator complex 8.0% (6/75) 3.24 4.3e-05 0.001405
GO:0051173 positive regulation of nitrogen compound metabolic process 22.67% (17/75) 1.54 5.1e-05 0.001633
GO:0006338 chromatin remodeling 8.0% (6/75) 3.18 5.4e-05 0.001705
GO:0010557 positive regulation of macromolecule biosynthetic process 18.67% (14/75) 1.75 5.6e-05 0.001738
GO:0070603 SWI/SNF superfamily-type complex 5.33% (4/75) 4.24 6.2e-05 0.001895
GO:0009893 positive regulation of metabolic process 25.33% (19/75) 1.39 6.8e-05 0.00204
GO:0050794 regulation of cellular process 50.67% (38/75) 0.8 7.4e-05 0.002122
GO:0033565 ESCRT-0 complex 2.67% (2/75) 7.22 7.6e-05 0.002138
GO:0032806 carboxy-terminal domain protein kinase complex 4.0% (3/75) 5.22 7.4e-05 0.00215
GO:0019222 regulation of metabolic process 38.67% (29/75) 1.01 7.3e-05 0.002155
GO:0140297 DNA-binding transcription factor binding 8.0% (6/75) 3.08 7.9e-05 0.002195
GO:0051090 regulation of DNA-binding transcription factor activity 6.67% (5/75) 3.5 8.5e-05 0.002256
GO:0060261 positive regulation of transcription initiation by RNA polymerase II 4.0% (3/75) 5.15 8.5e-05 0.002286
GO:0051130 positive regulation of cellular component organization 10.67% (8/75) 2.5 8.5e-05 0.002311
GO:0070651 nonfunctional rRNA decay 2.67% (2/75) 7.03 0.000101 0.002424
GO:0030947 regulation of vascular endothelial growth factor receptor signaling pathway 2.67% (2/75) 7.03 0.000101 0.002424
GO:0030948 negative regulation of vascular endothelial growth factor receptor signaling pathway 2.67% (2/75) 7.03 0.000101 0.002424
GO:0045842 positive regulation of mitotic metaphase/anaphase transition 4.0% (3/75) 5.09 9.7e-05 0.002429
GO:1901970 positive regulation of mitotic sister chromatid separation 4.0% (3/75) 5.09 9.7e-05 0.002429
GO:2000144 positive regulation of DNA-templated transcription initiation 4.0% (3/75) 5.09 9.7e-05 0.002429
GO:0045787 positive regulation of cell cycle 8.0% (6/75) 3.04 9.4e-05 0.002462
GO:0043130 ubiquitin binding 5.33% (4/75) 3.98 0.000125 0.002933
GO:0000502 proteasome complex 4.0% (3/75) 4.97 0.000125 0.002953
GO:0060260 regulation of transcription initiation by RNA polymerase II 4.0% (3/75) 4.94 0.000132 0.003052
GO:1904949 ATPase complex 5.33% (4/75) 3.95 0.000137 0.003076
GO:0050789 regulation of biological process 54.67% (41/75) 0.7 0.000136 0.003091
GO:0051254 positive regulation of RNA metabolic process 17.33% (13/75) 1.72 0.00014 0.003106
GO:1905369 endopeptidase complex 4.0% (3/75) 4.83 0.000166 0.003463
GO:0034063 stress granule assembly 4.0% (3/75) 4.83 0.000166 0.003463
GO:0048523 negative regulation of cellular process 26.67% (20/75) 1.25 0.000163 0.003497
GO:0090261 positive regulation of inclusion body assembly 2.67% (2/75) 6.7 0.000162 0.003507
GO:0007088 regulation of mitotic nuclear division 5.33% (4/75) 3.89 0.000162 0.003546
GO:0043170 macromolecule metabolic process 41.33% (31/75) 0.89 0.000181 0.003702
GO:0044093 positive regulation of molecular function 10.67% (8/75) 2.34 0.00018 0.003722
GO:0019904 protein domain specific binding 9.33% (7/75) 2.56 0.000191 0.003851
GO:0045893 positive regulation of DNA-templated transcription 16.0% (12/75) 1.76 0.000194 0.003867
GO:0005675 transcription factor TFIIH holo complex 2.67% (2/75) 6.57 0.000198 0.003901
GO:1902680 positive regulation of RNA biosynthetic process 16.0% (12/75) 1.75 0.000213 0.00394
GO:1903508 positive regulation of nucleic acid-templated transcription 16.0% (12/75) 1.75 0.000211 0.003942
GO:0031328 positive regulation of cellular biosynthetic process 18.67% (14/75) 1.58 0.000204 0.003947
GO:0032182 ubiquitin-like protein binding 5.33% (4/75) 3.79 0.00021 0.003973
GO:0060090 molecular adaptor activity 6.67% (5/75) 3.22 0.000209 0.003985
GO:2000142 regulation of DNA-templated transcription initiation 4.0% (3/75) 4.73 0.000204 0.003987
GO:0031326 regulation of cellular biosynthetic process 28.0% (21/75) 1.18 0.000222 0.004033
GO:0031323 regulation of cellular metabolic process 33.33% (25/75) 1.03 0.000227 0.004039
GO:0006325 chromatin organization 8.0% (6/75) 2.81 0.000221 0.00405
GO:1990234 transferase complex 12.0% (9/75) 2.11 0.000227 0.004077
GO:0033276 transcription factor TFTC complex 2.67% (2/75) 6.44 0.000237 0.004125
GO:0046695 SLIK (SAGA-like) complex 2.67% (2/75) 6.44 0.000237 0.004125
GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle 4.0% (3/75) 4.63 0.000248 0.004197
GO:1905820 positive regulation of chromosome separation 4.0% (3/75) 4.63 0.000248 0.004197
GO:0009891 positive regulation of biosynthetic process 18.67% (14/75) 1.55 0.000245 0.004219
GO:0003682 chromatin binding 9.33% (7/75) 2.48 0.000266 0.004461
GO:1990904 ribonucleoprotein complex 12.0% (9/75) 2.07 0.000283 0.004617
GO:0010494 cytoplasmic stress granule 5.33% (4/75) 3.68 0.000281 0.004628
GO:0099170 postsynaptic modulation of chemical synaptic transmission 2.67% (2/75) 6.33 0.000279 0.004642
GO:0003712 transcription coregulator activity 8.0% (6/75) 2.74 0.000289 0.004672
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 17.33% (13/75) 1.6 0.000302 0.004832
GO:0140030 modification-dependent protein binding 5.33% (4/75) 3.64 0.000308 0.004894
GO:0008104 protein localization 14.67% (11/75) 1.78 0.000328 0.005031
GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA 2.67% (2/75) 6.22 0.000326 0.005032
GO:0140035 ubiquitination-like modification-dependent protein binding 2.67% (2/75) 6.22 0.000326 0.005032
GO:0140036 ubiquitin-dependent protein binding 2.67% (2/75) 6.22 0.000326 0.005032
GO:0009889 regulation of biosynthetic process 28.0% (21/75) 1.13 0.000347 0.005266
GO:0006357 regulation of transcription by RNA polymerase II 13.33% (10/75) 1.89 0.000354 0.00528
GO:0051851 modulation by host of symbiont process 4.0% (3/75) 4.46 0.000353 0.005317
GO:0031325 positive regulation of cellular metabolic process 21.33% (16/75) 1.37 0.000361 0.005346
GO:0007346 regulation of mitotic cell cycle 8.0% (6/75) 2.64 0.00041 0.005977
GO:0033043 regulation of organelle organization 10.67% (8/75) 2.17 0.000409 0.006004
GO:0046426 negative regulation of receptor signaling pathway via JAK-STAT 2.67% (2/75) 6.03 0.000428 0.006139
GO:1904893 negative regulation of receptor signaling pathway via STAT 2.67% (2/75) 6.03 0.000428 0.006139
GO:0003677 DNA binding 21.33% (16/75) 1.34 0.000449 0.006329
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 4.0% (3/75) 4.34 0.000448 0.006371
GO:0050657 nucleic acid transport 5.33% (4/75) 3.48 0.000473 0.006566
GO:0050658 RNA transport 5.33% (4/75) 3.48 0.000473 0.006566
GO:0051236 establishment of RNA localization 5.33% (4/75) 3.47 0.000483 0.006647
GO:0065007 biological regulation 56.0% (42/75) 0.61 0.00051 0.00687
GO:1901990 regulation of mitotic cell cycle phase transition 6.67% (5/75) 2.94 0.000507 0.006877
GO:1901363 heterocyclic compound binding 42.67% (32/75) 0.79 0.000505 0.006902
GO:0036402 proteasome-activating activity 2.67% (2/75) 5.86 0.000545 0.007279
GO:0043122 regulation of I-kappaB kinase/NF-kappaB signaling 4.0% (3/75) 4.24 0.000558 0.007403
GO:0071824 protein-DNA complex subunit organization 5.33% (4/75) 3.41 0.000564 0.007427
GO:0097159 organic cyclic compound binding 42.67% (32/75) 0.78 0.000575 0.007508
GO:0051427 hormone receptor binding 2.67% (2/75) 5.78 0.000608 0.007611
GO:0051428 peptide hormone receptor binding 2.67% (2/75) 5.78 0.000608 0.007611
GO:0016580 Sin3 complex 2.67% (2/75) 5.78 0.000608 0.007611
GO:0016525 negative regulation of angiogenesis 2.67% (2/75) 5.78 0.000608 0.007611
GO:1901343 negative regulation of vasculature development 2.67% (2/75) 5.78 0.000608 0.007611
GO:2000181 negative regulation of blood vessel morphogenesis 2.67% (2/75) 5.78 0.000608 0.007611
GO:0003713 transcription coactivator activity 5.33% (4/75) 3.37 0.00062 0.007705
GO:0016570 histone modification 8.0% (6/75) 2.52 0.000632 0.007745
GO:0051783 regulation of nuclear division 5.33% (4/75) 3.37 0.000632 0.007795
GO:0090287 regulation of cellular response to growth factor stimulus 4.0% (3/75) 4.17 0.000641 0.007796
GO:1903541 regulation of exosomal secretion 2.67% (2/75) 5.7 0.000675 0.008103
GO:1903543 positive regulation of exosomal secretion 2.67% (2/75) 5.7 0.000675 0.008103
GO:0016573 histone acetylation 5.33% (4/75) 3.34 0.00068 0.008106
GO:0030071 regulation of mitotic metaphase/anaphase transition 4.0% (3/75) 4.13 0.000684 0.008107
GO:1902531 regulation of intracellular signal transduction 10.67% (8/75) 2.04 0.000735 0.008262
GO:0018394 peptidyl-lysine acetylation 5.33% (4/75) 3.31 0.00073 0.008265
GO:0032786 positive regulation of DNA-templated transcription, elongation 4.0% (3/75) 4.1 0.00073 0.008316
GO:0034243 regulation of transcription elongation by RNA polymerase II 4.0% (3/75) 4.12 0.000707 0.00832
GO:0008134 transcription factor binding 8.0% (6/75) 2.49 0.000721 0.008322
GO:0070682 proteasome regulatory particle assembly 2.67% (2/75) 5.63 0.000745 0.008326
GO:0006475 internal protein amino acid acetylation 5.33% (4/75) 3.32 0.000717 0.008332
GO:0018393 internal peptidyl-lysine acetylation 5.33% (4/75) 3.32 0.000717 0.008332
GO:0140535 intracellular protein-containing complex 10.67% (8/75) 2.04 0.00073 0.008368
GO:0045899 positive regulation of RNA polymerase II transcription preinitiation complex assembly 2.67% (2/75) 5.57 0.000819 0.008506
GO:0017056 structural constituent of nuclear pore 2.67% (2/75) 5.57 0.000819 0.008506
GO:1902692 regulation of neuroblast proliferation 2.67% (2/75) 5.57 0.000819 0.008506
GO:0000124 SAGA complex 2.67% (2/75) 5.57 0.000819 0.008506
GO:0051123 RNA polymerase II preinitiation complex assembly 2.67% (2/75) 5.57 0.000819 0.008506
GO:0000338 protein deneddylation 2.67% (2/75) 5.57 0.000819 0.008506
GO:0046425 regulation of receptor signaling pathway via JAK-STAT 2.67% (2/75) 5.57 0.000819 0.008506
GO:0010965 regulation of mitotic sister chromatid separation 4.0% (3/75) 4.04 0.000827 0.008547
GO:0009292 horizontal gene transfer 4.0% (3/75) 4.07 0.000778 0.008584
GO:0009294 DNA-mediated transformation 4.0% (3/75) 4.07 0.000778 0.008584
GO:0099080 supramolecular complex 10.67% (8/75) 2.02 0.000788 0.008639
GO:0010558 negative regulation of macromolecule biosynthetic process 13.33% (10/75) 1.74 0.000798 0.008704
GO:0070727 cellular macromolecule localization 14.67% (11/75) 1.63 0.000804 0.008709
GO:0007281 germ cell development 5.33% (4/75) 3.24 0.000868 0.008917
GO:0006355 regulation of DNA-templated transcription 21.33% (16/75) 1.25 0.000898 0.009064
GO:0031597 cytosolic proteasome complex 2.67% (2/75) 5.5 0.000895 0.009092
GO:0051252 regulation of RNA metabolic process 22.67% (17/75) 1.19 0.000892 0.009111
GO:1903506 regulation of nucleic acid-templated transcription 21.33% (16/75) 1.24 0.000925 0.009291
GO:2001141 regulation of RNA biosynthetic process 21.33% (16/75) 1.24 0.000931 0.009295
GO:0006473 protein acetylation 5.33% (4/75) 3.21 0.000944 0.009367
GO:0045898 regulation of RNA polymerase II transcription preinitiation complex assembly 2.67% (2/75) 5.44 0.000976 0.009473
GO:0110156 methylguanosine-cap decapping 2.67% (2/75) 5.44 0.000976 0.009473
GO:0006622 protein targeting to lysosome 2.67% (2/75) 5.44 0.000976 0.009473
GO:0043433 negative regulation of DNA-binding transcription factor activity 4.0% (3/75) 3.97 0.00096 0.009476
GO:0010608 post-transcriptional regulation of gene expression 9.33% (7/75) 2.14 0.001055 0.010192
GO:0110154 RNA decapping 2.67% (2/75) 5.33 0.001146 0.010831
GO:0070897 transcription preinitiation complex assembly 2.67% (2/75) 5.33 0.001146 0.010831
GO:0090288 negative regulation of cellular response to growth factor stimulus 2.67% (2/75) 5.33 0.001146 0.010831
GO:0046907 intracellular transport 12.0% (9/75) 1.79 0.001133 0.010885
GO:0000123 histone acetyltransferase complex 4.0% (3/75) 3.87 0.001167 0.010971
GO:0031334 positive regulation of protein-containing complex assembly 4.0% (3/75) 3.84 0.001231 0.011392
GO:1902099 regulation of metaphase/anaphase transition of cell cycle 4.0% (3/75) 3.84 0.001231 0.011392
GO:0051128 regulation of cellular component organization 16.0% (12/75) 1.46 0.001223 0.011436
GO:0032784 regulation of DNA-templated transcription elongation 4.0% (3/75) 3.82 0.001297 0.011941
GO:0031327 negative regulation of cellular biosynthetic process 13.33% (10/75) 1.64 0.001304 0.011942
GO:0006417 regulation of translation 8.0% (6/75) 2.32 0.001313 0.011961
GO:0008540 proteasome regulatory particle, base subcomplex 2.67% (2/75) 5.22 0.001329 0.011992
GO:0016075 rRNA catabolic process 2.67% (2/75) 5.22 0.001329 0.011992
GO:0033045 regulation of sister chromatid segregation 4.0% (3/75) 3.78 0.0014 0.012566
GO:0051641 cellular localization 16.0% (12/75) 1.44 0.001425 0.012722
GO:0031324 negative regulation of cellular metabolic process 16.0% (12/75) 1.43 0.001533 0.013351
GO:0008180 COP9 signalosome 2.67% (2/75) 5.12 0.001526 0.013359
GO:1901987 regulation of cell cycle phase transition 6.67% (5/75) 2.58 0.00152 0.01337
GO:0048519 negative regulation of biological process 29.33% (22/75) 0.93 0.001544 0.013388
GO:0015031 protein transport 10.67% (8/75) 1.87 0.001515 0.013396
GO:1905818 regulation of chromosome separation 4.0% (3/75) 3.74 0.001508 0.013403
GO:0016070 RNA metabolic process 16.0% (12/75) 1.42 0.001555 0.013415
GO:0009890 negative regulation of biosynthetic process 13.33% (10/75) 1.61 0.001568 0.013462
GO:0016197 endosomal transport 5.33% (4/75) 3.01 0.001583 0.013525
GO:0065009 regulation of molecular function 14.67% (11/75) 1.5 0.001628 0.013708
GO:0031248 protein acetyltransferase complex 4.0% (3/75) 3.7 0.001622 0.013724
GO:1902493 acetyltransferase complex 4.0% (3/75) 3.7 0.001622 0.013724
GO:0070822 Sin3-type complex 2.67% (2/75) 5.03 0.001736 0.014481
GO:0045765 regulation of angiogenesis 2.67% (2/75) 5.03 0.001736 0.014481
GO:0051172 negative regulation of nitrogen compound metabolic process 16.0% (12/75) 1.4 0.001751 0.014537
GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding 5.33% (4/75) 2.96 0.001793 0.014819
GO:0044389 ubiquitin-like protein ligase binding 6.67% (5/75) 2.52 0.001849 0.015075
GO:0034248 regulation of cellular amide metabolic process 8.0% (6/75) 2.22 0.001835 0.015094
GO:1901342 regulation of vasculature development 2.67% (2/75) 4.98 0.001845 0.015113
GO:0008160 protein tyrosine phosphatase activator activity 1.33% (1/75) 9.03 0.001919 0.015428
GO:0004151 dihydroorotase activity 1.33% (1/75) 9.03 0.001919 0.015428
GO:0061908 phagophore 1.33% (1/75) 9.03 0.001919 0.015428
GO:0033036 macromolecule localization 14.67% (11/75) 1.47 0.001928 0.015434
GO:0061462 protein localization to lysosome 2.67% (2/75) 4.94 0.001958 0.015606
GO:0043543 protein acylation 5.33% (4/75) 2.92 0.001969 0.01562
GO:0065004 protein-DNA complex assembly 4.0% (3/75) 3.59 0.002038 0.016096
GO:0070461 SAGA-type complex 2.67% (2/75) 4.9 0.002075 0.01624
GO:0036452 ESCRT complex 2.67% (2/75) 4.9 0.002075 0.01624
GO:0042127 regulation of cell population proliferation 9.33% (7/75) 1.96 0.002147 0.016736
GO:0019219 regulation of nucleobase-containing compound metabolic process 22.67% (17/75) 1.07 0.002229 0.017297
GO:0045184 establishment of protein localization 10.67% (8/75) 1.78 0.002244 0.017337
GO:0051983 regulation of chromosome segregation 4.0% (3/75) 3.52 0.002317 0.017669
GO:1902554 serine/threonine protein kinase complex 4.0% (3/75) 3.52 0.002317 0.017669
GO:0003674 molecular_function 76.0% (57/75) 0.35 0.002311 0.017781
GO:0034605 cellular response to heat 5.33% (4/75) 2.85 0.002356 0.017894
GO:0000785 chromatin 6.67% (5/75) 2.42 0.00246 0.0186
GO:0044238 primary metabolic process 48.0% (36/75) 0.59 0.002573 0.019047
GO:0090083 regulation of inclusion body assembly 2.67% (2/75) 4.74 0.002571 0.019114
GO:0005669 transcription factor TFIID complex 2.67% (2/75) 4.74 0.002571 0.019114
GO:0016251 RNA polymerase II general transcription initiation factor activity 2.67% (2/75) 4.74 0.002571 0.019114
GO:0007034 vacuolar transport 5.33% (4/75) 2.82 0.002568 0.019339
GO:0033044 regulation of chromosome organization 5.33% (4/75) 2.81 0.002631 0.019401
GO:0043248 proteasome assembly 2.67% (2/75) 4.7 0.002703 0.019764
GO:0036257 multivesicular body organization 2.67% (2/75) 4.7 0.002703 0.019764
GO:0008150 biological_process 77.33% (58/75) 0.33 0.002715 0.01977
GO:1903047 mitotic cell cycle process 8.0% (6/75) 2.1 0.002792 0.020084
GO:0010605 negative regulation of macromolecule metabolic process 17.33% (13/75) 1.25 0.002789 0.020146
GO:0051668 localization within membrane 6.67% (5/75) 2.38 0.002779 0.020154
GO:0034661 ncRNA catabolic process 2.67% (2/75) 4.67 0.002838 0.020171
GO:1904892 regulation of receptor signaling pathway via STAT 2.67% (2/75) 4.67 0.002838 0.020171
GO:1990351 transporter complex 4.0% (3/75) 3.42 0.002832 0.02029
GO:0006139 nucleobase-containing compound metabolic process 21.33% (16/75) 1.08 0.002964 0.020981
GO:0030718 germ-line stem cell population maintenance 2.67% (2/75) 4.63 0.002976 0.020986
GO:0051028 mRNA transport 4.0% (3/75) 3.39 0.002999 0.021062
GO:0090304 nucleic acid metabolic process 18.67% (14/75) 1.18 0.003028 0.021182
GO:0010564 regulation of cell cycle process 8.0% (6/75) 2.07 0.003126 0.021534
GO:0016234 inclusion body 2.67% (2/75) 4.6 0.003117 0.021554
GO:0010971 positive regulation of G2/M transition of mitotic cell cycle 2.67% (2/75) 4.6 0.003117 0.021554
GO:0034046 poly(G) binding 2.67% (2/75) 4.6 0.003117 0.021554
GO:0003723 RNA binding 16.0% (12/75) 1.3 0.003148 0.0216
GO:0051649 establishment of localization in cell 12.0% (9/75) 1.57 0.003267 0.02233
GO:0051241 negative regulation of multicellular organismal process 9.33% (7/75) 1.85 0.003291 0.022409
GO:1902911 protein kinase complex 4.0% (3/75) 3.33 0.003351 0.022727
GO:0015931 nucleobase-containing compound transport 5.33% (4/75) 2.7 0.003395 0.022936
GO:0072666 establishment of protein localization to vacuole 4.0% (3/75) 3.31 0.003536 0.023801
GO:1902751 positive regulation of cell cycle G2/M phase transition 2.67% (2/75) 4.5 0.00356 0.023871
GO:0006397 mRNA processing 6.67% (5/75) 2.29 0.003619 0.024176
GO:0003219 cardiac right ventricle formation 1.33% (1/75) 8.03 0.003834 0.024506
GO:1990893 mitotic chromosome centromere condensation 1.33% (1/75) 8.03 0.003834 0.024506
GO:0042292 URM1 activating enzyme activity 1.33% (1/75) 8.03 0.003834 0.024506
GO:0061604 molybdopterin-synthase sulfurtransferase activity 1.33% (1/75) 8.03 0.003834 0.024506
GO:0061605 molybdopterin-synthase adenylyltransferase activity 1.33% (1/75) 8.03 0.003834 0.024506
GO:0016587 Isw1 complex 1.33% (1/75) 8.03 0.003834 0.024506
GO:0060962 regulation of ribosomal protein gene transcription by RNA polymerase II 1.33% (1/75) 8.03 0.003834 0.024506
GO:0060963 positive regulation of ribosomal protein gene transcription by RNA polymerase II 1.33% (1/75) 8.03 0.003834 0.024506
GO:0048133 male germ-line stem cell asymmetric division 1.33% (1/75) 8.03 0.003834 0.024506
GO:0016598 protein arginylation 1.33% (1/75) 8.03 0.003834 0.024506
GO:1902117 positive regulation of organelle assembly 2.67% (2/75) 4.44 0.00387 0.024561
GO:0005771 multivesicular body 2.67% (2/75) 4.44 0.00387 0.024561
GO:2000177 regulation of neural precursor cell proliferation 2.67% (2/75) 4.47 0.003713 0.024714
GO:0071705 nitrogen compound transport 13.33% (10/75) 1.43 0.003816 0.025305
GO:0019538 protein metabolic process 25.33% (19/75) 0.91 0.004194 0.026334
GO:0008143 poly(A) binding 2.67% (2/75) 4.38 0.004192 0.026418
GO:0045921 positive regulation of exocytosis 2.67% (2/75) 4.38 0.004192 0.026418
GO:0051247 positive regulation of protein metabolic process 9.33% (7/75) 1.78 0.004238 0.026515
GO:0010498 proteasomal protein catabolic process 6.67% (5/75) 2.24 0.004261 0.026568
GO:0006807 nitrogen compound metabolic process 42.67% (32/75) 0.61 0.004332 0.026914
GO:0005575 cellular_component 76.0% (57/75) 0.32 0.004504 0.027888
GO:0016607 nuclear speck 5.33% (4/75) 2.58 0.004568 0.028186
GO:0072665 protein localization to vacuole 4.0% (3/75) 3.17 0.004629 0.028461
GO:0090305 nucleic acid phosphodiester bond hydrolysis 5.33% (4/75) 2.57 0.004661 0.028561
GO:0031981 nuclear lumen 4.0% (3/75) 3.15 0.004778 0.029177
GO:0010324 membrane invagination 2.67% (2/75) 4.27 0.004873 0.029657
GO:0023051 regulation of signaling 17.33% (13/75) 1.16 0.004948 0.03001
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling 2.67% (2/75) 4.24 0.005051 0.030322
GO:0140223 general transcription initiation factor activity 2.67% (2/75) 4.24 0.005051 0.030322
GO:0006508 proteolysis 10.67% (8/75) 1.59 0.005049 0.030519
GO:0006886 intracellular protein transport 8.0% (6/75) 1.92 0.005121 0.030637
GO:0051726 regulation of cell cycle 9.33% (7/75) 1.73 0.005173 0.030848
GO:0050768 negative regulation of neurogenesis 2.67% (2/75) 4.22 0.005231 0.030988
GO:0090311 regulation of protein deacetylation 2.67% (2/75) 4.22 0.005231 0.030988
GO:0010646 regulation of cell communication 17.33% (13/75) 1.14 0.005255 0.031023
GO:0051961 negative regulation of nervous system development 2.67% (2/75) 4.19 0.005415 0.031863
GO:2000112 regulation of cellular macromolecule biosynthetic process 8.0% (6/75) 1.9 0.005486 0.032171
GO:0097396 response to interleukin-17 1.33% (1/75) 7.44 0.005745 0.032411
GO:0097398 cellular response to interleukin-17 1.33% (1/75) 7.44 0.005745 0.032411
GO:0030159 signaling receptor complex adaptor activity 1.33% (1/75) 7.44 0.005745 0.032411
GO:0003128 heart field specification 1.33% (1/75) 7.44 0.005745 0.032411
GO:0003139 secondary heart field specification 1.33% (1/75) 7.44 0.005745 0.032411
GO:0003207 cardiac chamber formation 1.33% (1/75) 7.44 0.005745 0.032411
GO:0003211 cardiac ventricle formation 1.33% (1/75) 7.44 0.005745 0.032411
GO:0051731 polynucleotide 5'-hydroxyl-kinase activity 1.33% (1/75) 7.44 0.005745 0.032411
GO:0051664 nuclear pore localization 1.33% (1/75) 7.44 0.005745 0.032411
GO:0060340 positive regulation of type I interferon-mediated signaling pathway 1.33% (1/75) 7.44 0.005745 0.032411
GO:0097013 phagocytic vesicle lumen 1.33% (1/75) 7.44 0.005745 0.032411
GO:0004046 aminoacylase activity 1.33% (1/75) 7.44 0.005745 0.032411
GO:0051253 negative regulation of RNA metabolic process 10.67% (8/75) 1.54 0.006117 0.034398
GO:0051248 negative regulation of protein metabolic process 8.0% (6/75) 1.85 0.006411 0.035938
GO:0051603 proteolysis involved in protein catabolic process 8.0% (6/75) 1.85 0.006517 0.036415
GO:0009892 negative regulation of metabolic process 17.33% (13/75) 1.1 0.006605 0.036791
GO:0030261 chromosome condensation 2.67% (2/75) 4.03 0.006781 0.037539
GO:0017145 stem cell division 2.67% (2/75) 4.03 0.006781 0.037539
GO:0006635 fatty acid beta-oxidation 2.67% (2/75) 4.0 0.006988 0.038443
GO:0008333 endosome to lysosome transport 2.67% (2/75) 4.0 0.006988 0.038443
GO:0140110 transcription regulator activity 13.33% (10/75) 1.3 0.00706 0.0386
GO:0005654 nucleoplasm 12.0% (9/75) 1.39 0.007059 0.038715
GO:0042169 SH2 domain binding 1.33% (1/75) 7.03 0.007653 0.03942
GO:0003905 alkylbase DNA N-glycosylase activity 1.33% (1/75) 7.03 0.007653 0.03942
GO:0035851 Krueppel-associated box domain binding 1.33% (1/75) 7.03 0.007653 0.03942
GO:0042475 odontogenesis of dentin-containing tooth 1.33% (1/75) 7.03 0.007653 0.03942
GO:0042531 positive regulation of tyrosine phosphorylation of STAT protein 1.33% (1/75) 7.03 0.007653 0.03942
GO:0060788 ectodermal placode formation 1.33% (1/75) 7.03 0.007653 0.03942
GO:0060789 hair follicle placode formation 1.33% (1/75) 7.03 0.007653 0.03942
GO:0061198 fungiform papilla formation 1.33% (1/75) 7.03 0.007653 0.03942
GO:2000343 positive regulation of chemokine (C-X-C motif) ligand 2 production 1.33% (1/75) 7.03 0.007653 0.03942
GO:2001228 regulation of response to gamma radiation 1.33% (1/75) 7.03 0.007653 0.03942
GO:2001229 negative regulation of response to gamma radiation 1.33% (1/75) 7.03 0.007653 0.03942
GO:0002143 tRNA wobble position uridine thiolation 1.33% (1/75) 7.03 0.007653 0.03942
GO:0008265 Mo-molybdopterin cofactor sulfurase activity 1.33% (1/75) 7.03 0.007653 0.03942
GO:0032447 protein urmylation 1.33% (1/75) 7.03 0.007653 0.03942
GO:1903241 U2-type prespliceosome assembly 1.33% (1/75) 7.03 0.007653 0.03942
GO:0005962 mitochondrial isocitrate dehydrogenase complex (NAD+) 1.33% (1/75) 7.03 0.007653 0.03942
GO:0045242 isocitrate dehydrogenase complex (NAD+) 1.33% (1/75) 7.03 0.007653 0.03942
GO:0032777 Piccolo NuA4 histone acetyltransferase complex 1.33% (1/75) 7.03 0.007653 0.03942
GO:0019899 enzyme binding 13.33% (10/75) 1.28 0.007691 0.0395
GO:0072657 protein localization to membrane 5.33% (4/75) 2.36 0.007743 0.03965
GO:0022402 cell cycle process 10.67% (8/75) 1.48 0.00788 0.04012
GO:0009987 cellular process 66.67% (50/75) 0.35 0.007909 0.040157
GO:0005829 cytosol 25.33% (19/75) 0.83 0.007864 0.040157
GO:0030163 protein catabolic process 6.67% (5/75) 2.04 0.007413 0.040409
GO:0022607 cellular component assembly 14.67% (11/75) 1.21 0.007465 0.040565
GO:0010721 negative regulation of cell development 2.67% (2/75) 3.9 0.008063 0.040706
GO:0043405 regulation of MAP kinase activity 2.67% (2/75) 3.9 0.008063 0.040706
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 4.0% (3/75) 2.87 0.008181 0.041182
GO:0030371 translation repressor activity 2.67% (2/75) 3.88 0.008287 0.041598
GO:0043065 positive regulation of apoptotic process 4.0% (3/75) 2.84 0.008603 0.043066
GO:0042176 regulation of protein catabolic process 5.33% (4/75) 2.3 0.008985 0.044852
GO:0046601 positive regulation of centriole replication 1.33% (1/75) 6.7 0.009557 0.045169
GO:0010092 specification of animal organ identity 1.33% (1/75) 6.7 0.009557 0.045169
GO:0034657 GID complex 1.33% (1/75) 6.7 0.009557 0.045169
GO:0071390 cellular response to ecdysone 1.33% (1/75) 6.7 0.009557 0.045169
GO:0001751 compound eye photoreceptor cell differentiation 1.33% (1/75) 6.7 0.009557 0.045169
GO:0001975 response to amphetamine 1.33% (1/75) 6.7 0.009557 0.045169
GO:0007492 endoderm development 1.33% (1/75) 6.7 0.009557 0.045169
GO:0010718 positive regulation of epithelial to mesenchymal transition 1.33% (1/75) 6.7 0.009557 0.045169
GO:0032732 positive regulation of interleukin-1 production 1.33% (1/75) 6.7 0.009557 0.045169
GO:1902435 regulation of male mating behavior 1.33% (1/75) 6.7 0.009557 0.045169
GO:1902437 positive regulation of male mating behavior 1.33% (1/75) 6.7 0.009557 0.045169
GO:2000341 regulation of chemokine (C-X-C motif) ligand 2 production 1.33% (1/75) 6.7 0.009557 0.045169
GO:0004792 thiosulfate sulfurtransferase activity 1.33% (1/75) 6.7 0.009557 0.045169
GO:0032324 molybdopterin cofactor biosynthetic process 1.33% (1/75) 6.7 0.009557 0.045169
GO:0042868 antisense RNA metabolic process 1.33% (1/75) 6.7 0.009557 0.045169
GO:0004449 isocitrate dehydrogenase (NAD+) activity 1.33% (1/75) 6.7 0.009557 0.045169
GO:0098722 asymmetric stem cell division 1.33% (1/75) 6.7 0.009557 0.045169
GO:0098728 germline stem cell asymmetric division 1.33% (1/75) 6.7 0.009557 0.045169
GO:2001243 negative regulation of intrinsic apoptotic signaling pathway 2.67% (2/75) 3.76 0.009685 0.045652
GO:0017148 negative regulation of translation 4.0% (3/75) 2.78 0.009716 0.045673
GO:0002039 p53 binding 2.67% (2/75) 3.8 0.009208 0.045835
GO:0016604 nuclear body 6.67% (5/75) 1.94 0.009856 0.046213
GO:0001664 G protein-coupled receptor binding 2.67% (2/75) 3.74 0.009928 0.046427
GO:0010629 negative regulation of gene expression 8.0% (6/75) 1.73 0.009493 0.047122
GO:1902533 positive regulation of intracellular signal transduction 5.33% (4/75) 2.25 0.010116 0.04718
GO:1903530 regulation of secretion by cell 4.0% (3/75) 2.75 0.010183 0.047368
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 10.67% (8/75) 1.41 0.010406 0.048283
GO:0006401 RNA catabolic process 4.0% (3/75) 2.73 0.010663 0.049343
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_209 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_257 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_116 0.007 Orthogroups with 8 Potato genotypes Compare
Sequences (75) (download table)

InterPro Domains

GO Terms

Family Terms