SOLTUB.AGRIA.G00000020575

Description : Copper transporter, putative

Gene families : OG_02_0000961 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020575
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_163

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005375	copper ion transmembrane transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006825	copper ion transport	None	Extended
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006878	cellular copper ion homeostasis	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015089	high-affinity copper ion transmembrane transporter activity	IEA	AHRD
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015679	plasma membrane copper ion transport	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0035434	copper ion transmembrane transport	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043621	protein self-association	IEA	AHRD
MF	GO:0046873	metal ion transmembrane transporter activity	None	Extended
MF	GO:0046915	transition metal ion transmembrane transporter activity	None	Extended
BP	GO:0046916	cellular transition metal ion homeostasis	None	Extended
BP	GO:0048235	pollen sperm cell differentiation	IEA	AHRD
BP	GO:0048364	root development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055070	copper ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098657	import into cell	None	Extended
BP	GO:0098659	inorganic cation import across plasma membrane	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:0098705	copper ion import across plasma membrane	IEA	AHRD
BP	GO:0098739	import across plasma membrane	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
BP	GO:0099402	plant organ development	None	Extended
BP	GO:0099587	inorganic ion import across plasma membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004364	glutathione transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005507	copper ion binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005774	vacuolar membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006749	glutathione metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006801	superoxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006826	iron ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006857	oligopeptide transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009404	toxin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009407	toxin catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009526	plastid envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0009704	de-etiolation	IEP	Predict GO terms from Neighborhoods
CC	GO:0009705	plant-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009734	auxin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009735	response to cytokinin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009739	response to gibberellin	IEP	Predict GO terms from Neighborhoods
BP	GO:0009791	post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010035	response to inorganic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010038	response to metal ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010039	response to iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010043	response to zinc ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0015603	iron chelate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015833	peptide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016530	metallochaperone activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016531	copper chaperone activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016532	superoxide dismutase copper chaperone activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0018973	trinitrotoluene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0018974	2,4,6-trinitrotoluene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019326	nitrotoluene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019430	removal of superoxide radicals	IEP	Predict GO terms from Neighborhoods
CC	GO:0031967	organelle envelope	IEP	Predict GO terms from Neighborhoods
CC	GO:0031975	envelope	IEP	Predict GO terms from Neighborhoods
BP	GO:0032501	multicellular organismal process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033212	iron import into cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0033214	siderophore-dependent iron import into cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0033218	amide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0034755	iron ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035672	oligopeptide transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042277	peptide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042886	amide transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042887	amide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0043295	glutathione binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043434	response to peptide hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0046256	2,4,6-trinitrotoluene catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046260	trinitrotoluene catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046263	nitrotoluene catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048316	seed development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048527	lateral root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048528	post-embryonic root development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048608	reproductive structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0051980	iron-nicotianamine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055072	iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0060416	response to growth hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0072341	modified amino acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072490	toluene-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072491	toluene-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072593	reactive oxygen species metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080148	negative regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090696	post-embryonic plant organ development	IEP	Predict GO terms from Neighborhoods
CC	GO:0098588	bounding membrane of organelle	IEP	Predict GO terms from Neighborhoods
BP	GO:0098754	detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:0098869	cellular oxidant detoxification	IEP	Predict GO terms from Neighborhoods
MF	GO:0140104	molecular carrier activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900367	positive regulation of defense response to insect	IEP	Predict GO terms from Neighborhoods
MF	GO:1900750	oligopeptide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1901652	response to peptide	IEP	Predict GO terms from Neighborhoods
BP	GO:1901678	iron coordination entity transport	IEP	Predict GO terms from Neighborhoods
MF	GO:1901681	sulfur compound binding	IEP	Predict GO terms from Neighborhoods
MF	GO:1904680	peptide transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1990748	cellular detoxification	IEP	Predict GO terms from Neighborhoods
BP	GO:2000068	regulation of defense response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:2000070	regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007274	Cop_transporter	33	80

External Links

No external refs found!

SOLTUB.AGRIA.G00000020575

Expression Profile

Co-expression Networks

Functional Annotation