SOLTUB.AGRIA.G00000020597

Description : Expansin

Gene families : OG_02_0015125 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020597
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_71

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	IEA	AHRD
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006949	syncytium formation	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009739	response to gibberellin	IEA	AHRD
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009826	unidimensional cell growth	IEA	AHRD
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010114	response to red light	IEA	AHRD
BP	GO:0010311	lateral root formation	IEA	AHRD
CC	GO:0016020	membrane	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080022	primary root development	IEA	AHRD
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1905393	plant organ formation	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
MF	GO:0004567	beta-mannosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008810	cellulase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009251	glucan catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009608	response to symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:0009610	response to symbiotic fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009624	response to nematode	IEP	Predict GO terms from Neighborhoods
BP	GO:0009856	pollination	IEP	Predict GO terms from Neighborhoods
BP	GO:0009900	dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010047	fruit dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010412	mannan metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016985	mannan endo-1,4-beta-mannosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019953	sexual reproduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0030245	cellulose catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030247	polysaccharide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030570	pectate lyase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031225	anchored component of membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0044247	cellular polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0045454	cell redox homeostasis	IEP	Predict GO terms from Neighborhoods
CC	GO:0046658	anchored component of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0051275	beta-glucan catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0055062	phosphate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061687	detoxification of inorganic compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0071585	detoxification of cadmium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0072506	trivalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:1990059	fruit valve development	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR009009	RlpA-like_DPBB	67	153
IPR036908	RlpA-like_sf	8	181
IPR007117	Expansin_CBD	164	241
IPR036749	Expansin_CBD_sf	160	251

External Links

No external refs found!

SOLTUB.AGRIA.G00000020597

Expression Profile

Co-expression Networks

Functional Annotation