Coexpression cluster: Cluster_71 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030570 pectate lyase activity 4.84% (3/62) 6.3 8e-06 0.001322
GO:0009923 fatty acid elongase complex 3.23% (2/62) 8.72 7e-06 0.001567
GO:0000272 polysaccharide catabolic process 9.68% (6/62) 3.52 1.4e-05 0.001677
GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides 4.84% (3/62) 6.03 1.3e-05 0.00178
GO:0042547 cell wall modification involved in multidimensional cell growth 6.45% (4/62) 5.05 7e-06 0.001784
GO:0030497 fatty acid elongation 4.84% (3/62) 6.98 2e-06 0.001801
GO:0071554 cell wall organization or biogenesis 17.74% (11/62) 2.23 1.8e-05 0.001946
GO:0009624 response to nematode 8.06% (5/62) 4.06 1.3e-05 0.001957
GO:0009828 plant-type cell wall loosening 6.45% (4/62) 5.07 6e-06 0.002256
GO:0046658 anchored component of plasma membrane 9.68% (6/62) 3.82 4e-06 0.002311
GO:0006949 syncytium formation 4.84% (3/62) 5.3 6.2e-05 0.003298
GO:0009423 chorismate biosynthetic process 4.84% (3/62) 5.3 6.2e-05 0.003298
GO:1903085 regulation of sinapate ester biosynthetic process 4.84% (3/62) 5.3 6.2e-05 0.003298
GO:1903086 negative regulation of sinapate ester biosynthetic process 4.84% (3/62) 5.3 6.2e-05 0.003298
GO:0031225 anchored component of membrane 9.68% (6/62) 3.23 4.3e-05 0.003501
GO:1900377 negative regulation of secondary metabolite biosynthetic process 4.84% (3/62) 5.24 7.1e-05 0.003551
GO:0046417 chorismate metabolic process 4.84% (3/62) 5.21 7.5e-05 0.003598
GO:0006631 fatty acid metabolic process 12.9% (8/62) 2.66 3.8e-05 0.003607
GO:0042545 cell wall modification 11.29% (7/62) 2.9 4.2e-05 0.003674
GO:0071555 cell wall organization 14.52% (9/62) 2.39 5.1e-05 0.003813
GO:0045229 external encapsulating structure organization 16.13% (10/62) 2.19 5.9e-05 0.003862
GO:0031226 intrinsic component of plasma membrane 11.29% (7/62) 2.83 5.6e-05 0.003932
GO:0008209 androgen metabolic process 3.23% (2/62) 6.98 0.00011 0.005073
GO:0005576 extracellular region 17.74% (11/62) 1.93 0.000119 0.005249
GO:0016052 carbohydrate catabolic process 9.68% (6/62) 2.9 0.000155 0.006562
GO:0000902 cell morphogenesis 16.13% (10/62) 2.0 0.000178 0.007227
GO:0035017 cuticle pattern formation 4.84% (3/62) 4.68 0.000227 0.008573
GO:0035338 long-chain fatty-acyl-CoA biosynthetic process 3.23% (2/62) 6.49 0.000223 0.008703
GO:0043650 dicarboxylic acid biosynthetic process 4.84% (3/62) 4.6 0.000266 0.009671
GO:0046949 fatty-acyl-CoA biosynthetic process 3.23% (2/62) 6.3 0.000293 0.009975
GO:0000904 cell morphogenesis involved in differentiation 12.9% (8/62) 2.23 0.000289 0.010189
GO:0030245 cellulose catabolic process 3.23% (2/62) 6.21 0.000332 0.010297
GO:0080091 regulation of raffinose metabolic process 4.84% (3/62) 4.51 0.000319 0.010526
GO:0042761 very long-chain fatty acid biosynthetic process 4.84% (3/62) 4.49 0.00033 0.010573
GO:0031224 intrinsic component of membrane 24.19% (15/62) 1.4 0.000387 0.011676
GO:1901957 regulation of cutin biosynthetic process 4.84% (3/62) 4.39 0.000405 0.011869
GO:0010091 trichome branching 6.45% (4/62) 3.5 0.000444 0.012668
GO:0005976 polysaccharide metabolic process 11.29% (7/62) 2.28 0.000582 0.015748
GO:1901332 negative regulation of lateral root development 4.84% (3/62) 4.23 0.000567 0.015754
GO:0008810 cellulase activity 3.23% (2/62) 5.78 0.000613 0.016182
GO:0000038 very long-chain fatty acid metabolic process 4.84% (3/62) 4.16 0.000653 0.016808
GO:0045723 positive regulation of fatty acid biosynthetic process 4.84% (3/62) 4.14 0.000671 0.016862
GO:0072330 monocarboxylic acid biosynthetic process 9.68% (6/62) 2.45 0.000799 0.019611
GO:0006723 cuticle hydrocarbon biosynthetic process 4.84% (3/62) 3.99 0.000913 0.021906
GO:0010065 primary meristem tissue development 4.84% (3/62) 3.98 0.000935 0.021944
GO:0010192 mucilage biosynthetic process 4.84% (3/62) 3.97 0.000958 0.021988
GO:0048508 embryonic meristem development 4.84% (3/62) 3.92 0.001052 0.023638
GO:0009664 plant-type cell wall organization 8.06% (5/62) 2.67 0.001151 0.025324
GO:0045923 positive regulation of fatty acid metabolic process 4.84% (3/62) 3.85 0.001204 0.025951
GO:0010811 positive regulation of cell-substrate adhesion 3.23% (2/62) 5.21 0.001344 0.027829
GO:0046394 carboxylic acid biosynthetic process 11.29% (7/62) 1.96 0.002062 0.027914
GO:0102339 3-oxo-arachidoyl-CoA reductase activity 1.61% (1/62) 9.3 0.001586 0.027916
GO:0102340 3-oxo-behenoyl-CoA reductase activity 1.61% (1/62) 9.3 0.001586 0.027916
GO:0102341 3-oxo-lignoceroyl-CoA reductase activity 1.61% (1/62) 9.3 0.001586 0.027916
GO:0102342 3-oxo-cerotoyl-CoA reductase activity 1.61% (1/62) 9.3 0.001586 0.027916
GO:0046848 hydroxyapatite binding 1.61% (1/62) 9.3 0.001586 0.027916
GO:0071529 cementum mineralization 1.61% (1/62) 9.3 0.001586 0.027916
GO:0102758 very-long-chain enoyl-CoA reductase activity 1.61% (1/62) 9.3 0.001586 0.027916
GO:1901681 sulfur compound binding 4.84% (3/62) 3.58 0.002058 0.02822
GO:0045490 pectin catabolic process 4.84% (3/62) 3.8 0.001341 0.028321
GO:0018973 trinitrotoluene metabolic process 3.23% (2/62) 4.91 0.002046 0.028428
GO:0018974 2,4,6-trinitrotoluene metabolic process 3.23% (2/62) 4.91 0.002046 0.028428
GO:0019326 nitrotoluene metabolic process 3.23% (2/62) 4.91 0.002046 0.028428
GO:0046256 2,4,6-trinitrotoluene catabolic process 3.23% (2/62) 4.91 0.002046 0.028428
GO:0046260 trinitrotoluene catabolic process 3.23% (2/62) 4.91 0.002046 0.028428
GO:0046263 nitrotoluene catabolic process 3.23% (2/62) 4.91 0.002046 0.028428
GO:0072490 toluene-containing compound metabolic process 3.23% (2/62) 4.91 0.002046 0.028428
GO:0072491 toluene-containing compound catabolic process 3.23% (2/62) 4.91 0.002046 0.028428
GO:0006633 fatty acid biosynthetic process 6.45% (4/62) 2.88 0.002178 0.029107
GO:0009827 plant-type cell wall modification 6.45% (4/62) 2.97 0.001712 0.029638
GO:1905393 plant organ formation 8.06% (5/62) 2.53 0.001741 0.029654
GO:0016835 carbon-oxygen lyase activity 6.45% (4/62) 2.96 0.001771 0.029685
GO:0071669 plant-type cell wall organization or biogenesis 9.68% (6/62) 2.22 0.001806 0.029796
GO:1901570 fatty acid derivative biosynthetic process 4.84% (3/62) 3.75 0.001487 0.030201
GO:0071369 cellular response to ethylene stimulus 3.23% (2/62) 4.94 0.001951 0.030743
GO:0010810 regulation of cell-substrate adhesion 3.23% (2/62) 4.94 0.001951 0.030743
GO:2000023 regulation of lateral root development 4.84% (3/62) 3.6 0.001985 0.030818
GO:0071365 cellular response to auxin stimulus 4.84% (3/62) 3.62 0.001913 0.031078
GO:0099402 plant organ development 16.13% (10/62) 1.59 0.001579 0.031467
GO:0032870 cellular response to hormone stimulus 8.06% (5/62) 2.42 0.002456 0.032013
GO:0048364 root development 11.29% (7/62) 1.92 0.002434 0.032125
GO:0048507 meristem development 4.84% (3/62) 3.35 0.003263 0.035888
GO:0009825 multidimensional cell growth 4.84% (3/62) 3.35 0.003263 0.035888
GO:0001968 fibronectin binding 1.61% (1/62) 8.3 0.00317 0.035993
GO:0016509 long-chain-3-hydroxyacyl-CoA dehydrogenase activity 1.61% (1/62) 8.3 0.00317 0.035993
GO:0018454 acetoacetyl-CoA reductase activity 1.61% (1/62) 8.3 0.00317 0.035993
GO:0014902 myotube differentiation 1.61% (1/62) 8.3 0.00317 0.035993
GO:0080023 3R-hydroxyacyl-CoA dehydratase activity 1.61% (1/62) 8.3 0.00317 0.035993
GO:0102158 very-long-chain 3-hydroxyacyl-CoA dehydratase activity 1.61% (1/62) 8.3 0.00317 0.035993
GO:0102343 3-hydroxy-arachidoyl-CoA dehydratase activity 1.61% (1/62) 8.3 0.00317 0.035993
GO:0102344 3-hydroxy-behenoyl-CoA dehydratase activity 1.61% (1/62) 8.3 0.00317 0.035993
GO:0102345 3-hydroxy-lignoceroyl-CoA dehydratase activity 1.61% (1/62) 8.3 0.00317 0.035993
GO:0051275 beta-glucan catabolic process 3.23% (2/62) 4.57 0.003238 0.036376
GO:0030312 external encapsulating structure 14.52% (9/62) 1.55 0.003342 0.036382
GO:0042537 benzene-containing compound metabolic process 6.45% (4/62) 2.7 0.00342 0.036852
GO:0005975 carbohydrate metabolic process 12.9% (8/62) 1.67 0.00347 0.037015
GO:0009505 plant-type cell wall 9.68% (6/62) 2.08 0.002899 0.037329
GO:0016053 organic acid biosynthetic process 11.29% (7/62) 1.82 0.003576 0.037759
GO:2000069 regulation of post-embryonic root development 4.84% (3/62) 3.29 0.003619 0.037834
GO:0035384 thioester biosynthetic process 3.23% (2/62) 4.44 0.003864 0.038499
GO:0071616 acyl-CoA biosynthetic process 3.23% (2/62) 4.44 0.003864 0.038499
GO:1900384 regulation of flavonol biosynthetic process 3.23% (2/62) 4.44 0.003864 0.038499
GO:0035336 long-chain fatty-acyl-CoA metabolic process 3.23% (2/62) 4.47 0.003735 0.038669
GO:0032787 monocarboxylic acid metabolic process 12.9% (8/62) 1.7 0.003042 0.038697
GO:0042304 regulation of fatty acid biosynthetic process 4.84% (3/62) 3.37 0.003117 0.039184
GO:0009629 response to gravity 6.45% (4/62) 2.65 0.003844 0.039405
GO:0010345 suberin biosynthetic process 4.84% (3/62) 3.2 0.004341 0.042841
GO:0010068 protoderm histogenesis 3.23% (2/62) 4.35 0.004403 0.043051
GO:1901568 fatty acid derivative metabolic process 4.84% (3/62) 3.15 0.004763 0.045317
GO:0045703 ketoreductase activity 1.61% (1/62) 7.72 0.004751 0.04561
GO:0016049 cell growth 12.9% (8/62) 1.6 0.004715 0.04568
GO:0043648 dicarboxylic acid metabolic process 4.84% (3/62) 3.14 0.004889 0.046093
GO:0010597 green leaf volatile biosynthetic process 4.84% (3/62) 3.11 0.005145 0.047657
GO:0035337 fatty-acyl-CoA metabolic process 3.23% (2/62) 4.23 0.005122 0.047865
GO:0019372 lipoxygenase pathway 4.84% (3/62) 3.1 0.005276 0.048029
GO:0009635 response to herbicide 3.23% (2/62) 4.21 0.005272 0.048408
GO:0071495 cellular response to endogenous stimulus 9.68% (6/62) 1.89 0.005499 0.049629
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_146 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_231 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_48 0.008 Orthogroups with 8 Potato genotypes Compare
Sequences (62) (download table)

InterPro Domains

GO Terms

Family Terms