| BP | GO:0000027 | ribosomal large subunit assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000049 | tRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000054 | ribosomal subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000055 | ribosomal large subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000178 | exosome (RNase complex) | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000959 | mitochondrial RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000963 | mitochondrial RNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001018 | mitochondrial promoter sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001054 | RNA polymerase I activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001667 | ameboidal-type cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001755 | neural crest cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001756 | somitogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001822 | kidney development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001826 | inner cell mass cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001837 | epithelial to mesenchymal transition | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001882 | nucleoside binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002926 | tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003747 | translation release factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004040 | amidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005697 | telomerase holoenzyme complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005736 | RNA polymerase I complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006360 | transcription by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006390 | mitochondrial transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006415 | translational termination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006469 | negative regulation of protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006528 | asparagine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007000 | nucleolus organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007219 | Notch signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007292 | female gamete generation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007566 | embryo implantation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008079 | translation termination factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008171 | O-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009303 | rRNA transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009451 | RNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009561 | megagametogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009683 | indoleacetic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009684 | indoleacetic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009794 | regulation of mitotic cell cycle, embryonic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009851 | auxin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009896 | positive regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009952 | anterior/posterior pattern specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009954 | proximal/distal pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010093 | specification of floral organ identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010467 | gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010589 | leaf proximal/distal pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014029 | neural crest formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016073 | snRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016149 | translation release factor activity, codon specific | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017069 | snRNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017126 | nucleologenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019210 | kinase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030162 | regulation of proteolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030177 | positive regulation of Wnt signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030488 | tRNA methylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030687 | preribosome, large subunit precursor | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031301 | integral component of organelle membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031331 | positive regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031350 | intrinsic component of plastid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031351 | integral component of plastid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031354 | intrinsic component of plastid outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031355 | integral component of plastid outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031358 | intrinsic component of chloroplast outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031359 | integral component of chloroplast outer membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031538 | negative regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031648 | protein destabilization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031966 | mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032092 | positive regulation of protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032259 | methylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032592 | integral component of mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032880 | regulation of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033108 | mitochondrial respiratory chain complex assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033673 | negative regulation of kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033750 | ribosome localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034098 | VCP-NPL4-UFD1 AAA ATPase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034214 | protein hexamerization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034245 | mitochondrial DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034414 | tRNA 3'-trailer cleavage, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035195 | miRNA-mediated gene silencing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035196 | miRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035265 | organ growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035279 | miRNA-mediated gene silencing by mRNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035282 | segmentation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040031 | snRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042273 | ribosomal large subunit biogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042645 | mitochondrial nucleoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042779 | tRNA 3'-trailer cleavage | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042781 | 3'-tRNA processing endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042790 | nucleolar large rRNA transcription by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043086 | negative regulation of catalytic activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043154 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043281 | regulation of cysteine-type endopeptidase activity involved in apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043414 | macromolecule methylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043864 | indoleacetamide hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044092 | negative regulation of molecular function | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045977 | positive regulation of mitotic cell cycle, embryonic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048477 | oogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048530 | fruit morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048705 | skeletal system morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048762 | mesenchymal cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050779 | RNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051972 | regulation of telomerase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051973 | positive regulation of telomerase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060341 | regulation of cellular localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061157 | mRNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061484 | hematopoietic stem cell homeostasis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061715 | obsolete miRNA 2'-O-methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070981 | L-asparagine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070982 | L-asparagine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071712 | ER-associated misfolded protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072684 | mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080178 | 5-carbamoylmethyl uridine residue modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090263 | positive regulation of canonical Wnt signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090497 | mesenchymal cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090615 | mitochondrial mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090701 | specification of plant organ identity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097322 | 7SK snRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098573 | intrinsic component of mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098781 | ncRNA transcription | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120259 | 7SK snRNP | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140053 | mitochondrial gene expression | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140747 | regulation of ncRNA transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900180 | regulation of protein localization to nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900182 | positive regulation of protein localization to nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904749 | regulation of protein localization to nucleolus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904869 | regulation of protein localization to Cajal body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904871 | positive regulation of protein localization to Cajal body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1905354 | exoribonuclease complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905380 | regulation of snRNA transcription by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905382 | positive regulation of snRNA transcription by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905634 | regulation of protein localization to chromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990234 | transferase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990275 | preribosome binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990276 | RNA 5'-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000024 | regulation of leaf development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000117 | negative regulation of cysteine-type endopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000278 | regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000573 | positive regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001267 | regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001268 | negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |