SOLTUB.AGRIA.G00000020712


Description : Ribonuclease P subunit p30


Gene families : OG_02_0022737 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000020712
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_65


Type GO Term Name Evidence Source
MF GO:0000171 ribonuclease MRP activity IEA AHRD
CC GO:0000172 ribonuclease MRP complex IEA AHRD
BP GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA AHRD
BP GO:0001682 tRNA 5'-leader removal IEA AHRD
MF GO:0004526 ribonuclease P activity IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0030681 multimeric ribonuclease P complex IEA AHRD
MF GO:0033204 ribonuclease P RNA binding IEA AHRD
BP GO:1905267 endonucleolytic cleavage involved in tRNA processing IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predict GO terms from Neighborhoods
MF GO:0000049 tRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0000054 ribosomal subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0000055 ribosomal large subunit export from nucleus IEP Predict GO terms from Neighborhoods
CC GO:0000176 nuclear exosome (RNase complex) IEP Predict GO terms from Neighborhoods
CC GO:0000178 exosome (RNase complex) IEP Predict GO terms from Neighborhoods
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000959 mitochondrial RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000963 mitochondrial RNA processing IEP Predict GO terms from Neighborhoods
MF GO:0001018 mitochondrial promoter sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001054 RNA polymerase I activity IEP Predict GO terms from Neighborhoods
BP GO:0001510 RNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0001667 ameboidal-type cell migration IEP Predict GO terms from Neighborhoods
BP GO:0001755 neural crest cell migration IEP Predict GO terms from Neighborhoods
BP GO:0001756 somitogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001822 kidney development IEP Predict GO terms from Neighborhoods
BP GO:0001826 inner cell mass cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0001837 epithelial to mesenchymal transition IEP Predict GO terms from Neighborhoods
MF GO:0001882 nucleoside binding IEP Predict GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Predict GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Predict GO terms from Neighborhoods
BP GO:0002926 tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IEP Predict GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
MF GO:0004040 amidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predict GO terms from Neighborhoods
MF GO:0004860 protein kinase inhibitor activity IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005697 telomerase holoenzyme complex IEP Predict GO terms from Neighborhoods
CC GO:0005736 RNA polymerase I complex IEP Predict GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006360 transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006390 mitochondrial transcription IEP Predict GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Predict GO terms from Neighborhoods
BP GO:0006469 negative regulation of protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0006528 asparagine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006529 asparagine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007000 nucleolus organization IEP Predict GO terms from Neighborhoods
BP GO:0007219 Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007292 female gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007346 regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0007566 embryo implantation IEP Predict GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Predict GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009303 rRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Predict GO terms from Neighborhoods
BP GO:0009561 megagametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0009683 indoleacetic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009684 indoleacetic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009794 regulation of mitotic cell cycle, embryonic IEP Predict GO terms from Neighborhoods
BP GO:0009851 auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009896 positive regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009952 anterior/posterior pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009954 proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010093 specification of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0010467 gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010589 leaf proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0014029 neural crest formation IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016149 translation release factor activity, codon specific IEP Predict GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predict GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predict GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0017126 nucleologenesis IEP Predict GO terms from Neighborhoods
MF GO:0019210 kinase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0030150 protein import into mitochondrial matrix IEP Predict GO terms from Neighborhoods
BP GO:0030162 regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0030177 positive regulation of Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Predict GO terms from Neighborhoods
CC GO:0030687 preribosome, large subunit precursor IEP Predict GO terms from Neighborhoods
CC GO:0030880 RNA polymerase complex IEP Predict GO terms from Neighborhoods
CC GO:0031300 intrinsic component of organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031301 integral component of organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031331 positive regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031350 intrinsic component of plastid membrane IEP Predict GO terms from Neighborhoods
CC GO:0031351 integral component of plastid membrane IEP Predict GO terms from Neighborhoods
CC GO:0031354 intrinsic component of plastid outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031355 integral component of plastid outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031358 intrinsic component of chloroplast outer membrane IEP Predict GO terms from Neighborhoods
CC GO:0031359 integral component of chloroplast outer membrane IEP Predict GO terms from Neighborhoods
BP GO:0031538 negative regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031648 protein destabilization IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0032092 positive regulation of protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032259 methylation IEP Predict GO terms from Neighborhoods
MF GO:0032549 ribonucleoside binding IEP Predict GO terms from Neighborhoods
CC GO:0032592 integral component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032880 regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Predict GO terms from Neighborhoods
BP GO:0033673 negative regulation of kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0033750 ribosome localization IEP Predict GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Predict GO terms from Neighborhoods
CC GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:0034214 protein hexamerization IEP Predict GO terms from Neighborhoods
CC GO:0034245 mitochondrial DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0035265 organ growth IEP Predict GO terms from Neighborhoods
BP GO:0035279 miRNA-mediated gene silencing by mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0035282 segmentation IEP Predict GO terms from Neighborhoods
BP GO:0040031 snRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0042273 ribosomal large subunit biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0042645 mitochondrial nucleoid IEP Predict GO terms from Neighborhoods
BP GO:0042779 tRNA 3'-trailer cleavage IEP Predict GO terms from Neighborhoods
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0042790 nucleolar large rRNA transcription by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0043086 negative regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Predict GO terms from Neighborhoods
MF GO:0043864 indoleacetamide hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044092 negative regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0045977 positive regulation of mitotic cell cycle, embryonic IEP Predict GO terms from Neighborhoods
BP GO:0048477 oogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048530 fruit morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048705 skeletal system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048762 mesenchymal cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050779 RNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0050790 regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0051205 protein insertion into membrane IEP Predict GO terms from Neighborhoods
BP GO:0051248 negative regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051972 regulation of telomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0051973 positive regulation of telomerase activity IEP Predict GO terms from Neighborhoods
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0061157 mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0061484 hematopoietic stem cell homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predict GO terms from Neighborhoods
BP GO:0061715 obsolete miRNA 2'-O-methylation IEP Predict GO terms from Neighborhoods
BP GO:0065003 protein-containing complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0070585 protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0070981 L-asparagine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070982 L-asparagine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071712 ER-associated misfolded protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0072684 mitochondrial tRNA 3'-trailer cleavage, endonucleolytic IEP Predict GO terms from Neighborhoods
BP GO:0080178 5-carbamoylmethyl uridine residue modification IEP Predict GO terms from Neighborhoods
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090497 mesenchymal cell migration IEP Predict GO terms from Neighborhoods
BP GO:0090615 mitochondrial mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0090701 specification of plant organ identity IEP Predict GO terms from Neighborhoods
MF GO:0097322 7SK snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
BP GO:0097659 nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Predict GO terms from Neighborhoods
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Predict GO terms from Neighborhoods
BP GO:0098781 ncRNA transcription IEP Predict GO terms from Neighborhoods
CC GO:0120259 7SK snRNP IEP Predict GO terms from Neighborhoods
BP GO:0140053 mitochondrial gene expression IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0140747 regulation of ncRNA transcription IEP Predict GO terms from Neighborhoods
BP GO:1900180 regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900182 positive regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1904749 regulation of protein localization to nucleolus IEP Predict GO terms from Neighborhoods
BP GO:1904869 regulation of protein localization to Cajal body IEP Predict GO terms from Neighborhoods
BP GO:1904871 positive regulation of protein localization to Cajal body IEP Predict GO terms from Neighborhoods
CC GO:1905354 exoribonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1905380 regulation of snRNA transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:1905382 positive regulation of snRNA transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:1905634 regulation of protein localization to chromatin IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
MF GO:1990275 preribosome binding IEP Predict GO terms from Neighborhoods
MF GO:1990276 RNA 5'-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000117 negative regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000278 regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000573 positive regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001267 regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001268 negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016195 Pol/histidinol_Pase-like 30 253
IPR002738 RNase_P_p30 4 248
No external refs found!