| MF | GO:0000287 | magnesium ion binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000700 | mismatch base pair DNA N-glycosylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000701 | purine-specific mismatch base pair DNA N-glycosylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000723 | telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000731 | DNA synthesis involved in DNA repair | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000786 | nucleosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001101 | response to acid chemical | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001889 | liver development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003682 | chromatin binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003896 | DNA primase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004170 | dUTP diphosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005102 | signaling receptor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005622 | intracellular anatomical structure | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005652 | nuclear lamina | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005657 | replication fork | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005658 | alpha DNA polymerase:primase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005700 | polytene chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005721 | pericentric heterochromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006195 | purine nucleotide catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006226 | dUMP biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006244 | pyrimidine nucleotide catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006271 | DNA strand elongation involved in DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006272 | leading strand elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006287 | base-excision repair, gap-filling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006298 | mismatch repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006301 | postreplication repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007113 | endomitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007127 | meiosis I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007135 | meiosis II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009129 | pyrimidine nucleoside monophosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009130 | pyrimidine nucleoside monophosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009143 | nucleoside triphosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009146 | purine nucleoside triphosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009147 | pyrimidine nucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009149 | pyrimidine nucleoside triphosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009151 | purine deoxyribonucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009155 | purine deoxyribonucleotide catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009157 | deoxyribonucleoside monophosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009162 | deoxyribonucleoside monophosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009176 | pyrimidine deoxyribonucleoside monophosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009177 | pyrimidine deoxyribonucleoside monophosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009200 | deoxyribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009204 | deoxyribonucleoside triphosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009211 | pyrimidine deoxyribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009213 | pyrimidine deoxyribonucleoside triphosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009215 | purine deoxyribonucleoside triphosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009217 | purine deoxyribonucleoside triphosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009219 | pyrimidine deoxyribonucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009221 | pyrimidine deoxyribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009223 | pyrimidine deoxyribonucleotide catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009264 | deoxyribonucleotide catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009265 | 2'-deoxyribonucleotide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009394 | 2'-deoxyribonucleotide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009410 | response to xenobiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009532 | plastid stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009534 | chloroplast thylakoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009561 | megagametogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009570 | chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009579 | thylakoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010197 | polar nucleus fusion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010369 | chromocenter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010449 | root meristem growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016458 | obsolete gene silencing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019103 | pyrimidine nucleotide binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019692 | deoxyribose phosphate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019985 | translesion synthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022616 | DNA strand elongation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030331 | nuclear estrogen receptor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030337 | DNA polymerase processivity factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030527 | structural constituent of chromatin | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030545 | signaling receptor regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030547 | signaling receptor inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030894 | replisome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030971 | receptor tyrosine kinase binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030983 | mismatched DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031100 | animal organ regeneration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031261 | DNA replication preinitiation complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031297 | replication fork processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031397 | negative regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031491 | nucleosome binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031492 | nucleosomal DNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031976 | plastid thylakoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031984 | organelle subcompartment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032069 | regulation of nuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032070 | regulation of deoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032075 | positive regulation of nuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032077 | positive regulation of deoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032135 | DNA insertion or deletion binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032139 | dinucleotide insertion or deletion binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032200 | telomere organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032201 | telomere maintenance via semi-conservative replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032355 | response to estradiol | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032404 | mismatch repair complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032405 | MutLalpha complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032552 | deoxyribonucleotide binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032556 | pyrimidine deoxyribonucleotide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035035 | histone acetyltransferase binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035059 | RCAF complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035266 | meristem growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035862 | dITP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035863 | dITP catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035870 | dITP diphosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040020 | regulation of meiotic nuclear division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042023 | DNA endoreduplication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042276 | error-prone translesion synthesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042575 | DNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042698 | ovulation cycle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042975 | peroxisome proliferator activated receptor binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043596 | nuclear replication fork | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043626 | PCNA complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044786 | cell cycle DNA replication | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044796 | DNA polymerase processivity factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044815 | DNA packaging complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044849 | estrous cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045005 | DNA-templated DNA replication maintenance of fidelity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045739 | positive regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045740 | positive regulation of DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046078 | dUMP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046080 | dUTP metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046081 | dUTP catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046385 | deoxyribose phosphate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046386 | deoxyribose phosphate catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046982 | protein heterodimerization activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046983 | protein dimerization activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047429 | nucleoside triphosphate diphosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048732 | gland development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051384 | response to glucocorticoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051438 | regulation of ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051444 | negative regulation of ubiquitin-protein transferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060771 | phyllotactic patterning | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061983 | meiosis II cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070182 | DNA polymerase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070206 | protein trimerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070207 | protein homotrimerization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070557 | PCNA-p21 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071466 | cellular response to xenobiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071548 | response to dexamethasone | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072523 | purine-containing compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072529 | pyrimidine-containing compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097421 | liver regeneration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0150005 | enzyme activator complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902065 | response to L-glutamate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902990 | mitotic telomere maintenance via semi-conservative replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904666 | regulation of ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904667 | negative regulation of ubiquitin protein ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990782 | protein tyrosine kinase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001020 | regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001022 | positive regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |