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  5. SOLTUB.AGRIA.G00000021290

SOLTUB.AGRIA.G00000021290


Description : ARM repeat superfamily protein


Gene families : OG_02_0022776 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021290
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_118


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000118 histone deacetylase complex IEP Predict GO terms from Neighborhoods
MF GO:0000149 SNARE binding IEP Predict GO terms from Neighborhoods
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predict GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predict GO terms from Neighborhoods
MF GO:0004407 histone deacetylase activity IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
BP GO:0006476 protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
MF GO:0008270 zinc ion binding IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0008535 respiratory chain complex IV assembly IEP Predict GO terms from Neighborhoods
BP GO:0009790 embryo development IEP Predict GO terms from Neighborhoods
BP GO:0009887 animal organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010256 endomembrane system organization IEP Predict GO terms from Neighborhoods
BP GO:0010257 NADH dehydrogenase complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0014003 oligodendrocyte development IEP Predict GO terms from Neighborhoods
BP GO:0016575 histone deacetylation IEP Predict GO terms from Neighborhoods
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predict GO terms from Neighborhoods
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predict GO terms from Neighborhoods
BP GO:0017004 cytochrome complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0017136 NAD-dependent histone deacetylase activity IEP Predict GO terms from Neighborhoods
MF GO:0019213 deacetylase activity IEP Predict GO terms from Neighborhoods
BP GO:0021782 glial cell development IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Predict GO terms from Neighborhoods
BP GO:0031056 regulation of histone modification IEP Predict GO terms from Neighborhoods
BP GO:0031057 negative regulation of histone modification IEP Predict GO terms from Neighborhoods
MF GO:0031078 histone deacetylase activity (H3-K14 specific) IEP Predict GO terms from Neighborhoods
BP GO:0031400 negative regulation of protein modification process IEP Predict GO terms from Neighborhoods
MF GO:0032041 NAD-dependent histone deacetylase activity (H3-K14 specific) IEP Predict GO terms from Neighborhoods
BP GO:0032981 mitochondrial respiratory chain complex I assembly IEP Predict GO terms from Neighborhoods
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0033558 protein lysine deacetylase activity IEP Predict GO terms from Neighborhoods
BP GO:0033617 mitochondrial cytochrome c oxidase assembly IEP Predict GO terms from Neighborhoods
MF GO:0034979 NAD-dependent protein deacetylase activity IEP Predict GO terms from Neighborhoods
BP GO:0035295 tube development IEP Predict GO terms from Neighborhoods
BP GO:0035459 vesicle cargo loading IEP Predict GO terms from Neighborhoods
BP GO:0035601 protein deacylation IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0070932 histone H3 deacetylation IEP Predict GO terms from Neighborhoods
CC GO:0070971 endoplasmic reticulum exit site IEP Predict GO terms from Neighborhoods
BP GO:0072359 circulatory system development IEP Predict GO terms from Neighborhoods
BP GO:0090110 COPII-coated vesicle cargo loading IEP Predict GO terms from Neighborhoods
BP GO:0098732 macromolecule deacylation IEP Predict GO terms from Neighborhoods
MF GO:0140297 DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016024 ARM-type_fold 78 152
No external refs found!