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  5. SOLTUB.AGRIA.G00000021344

SOLTUB.AGRIA.G00000021344


Description : Expansin


Gene families : OG_02_0006158 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021344
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_29


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006949 syncytium formation IEA AHRD
CC GO:0009505 plant-type cell wall IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0009739 response to gibberellin IEA AHRD
BP GO:0009826 unidimensional cell growth IEA AHRD
BP GO:0009828 plant-type cell wall loosening IEA AHRD
BP GO:0010114 response to red light IEA AHRD
BP GO:0010311 lateral root formation IEA AHRD
CC GO:0016020 membrane IEA AHRD
BP GO:0080022 primary root development IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000916 actomyosin contractile ring contraction IEP Predict GO terms from Neighborhoods
BP GO:0001558 regulation of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0001725 stress fiber IEP Predict GO terms from Neighborhoods
CC GO:0001726 ruffle IEP Predict GO terms from Neighborhoods
CC GO:0001891 phagocytic cup IEP Predict GO terms from Neighborhoods
BP GO:0001951 intestinal D-glucose absorption IEP Predict GO terms from Neighborhoods
CC GO:0002102 podosome IEP Predict GO terms from Neighborhoods
BP GO:0002263 cell activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002285 lymphocyte activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002286 T cell activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0002366 leukocyte activation involved in immune response IEP Predict GO terms from Neighborhoods
BP GO:0003006 developmental process involved in reproduction IEP Predict GO terms from Neighborhoods
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004888 transmembrane signaling receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005178 integrin binding IEP Predict GO terms from Neighborhoods
MF GO:0005488 binding IEP Predict GO terms from Neighborhoods
MF GO:0005496 steroid binding IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005884 actin filament IEP Predict GO terms from Neighborhoods
CC GO:0005903 brush border IEP Predict GO terms from Neighborhoods
CC GO:0005925 focal adhesion IEP Predict GO terms from Neighborhoods
CC GO:0005938 cell cortex IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007391 dorsal closure IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009641 shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:0009642 response to light intensity IEP Predict GO terms from Neighborhoods
BP GO:0009645 response to low light intensity stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009646 response to absence of light IEP Predict GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Predict GO terms from Neighborhoods
BP GO:0009734 auxin-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009741 response to brassinosteroid IEP Predict GO terms from Neighborhoods
BP GO:0009746 response to hexose IEP Predict GO terms from Neighborhoods
BP GO:0009755 hormone-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0009921 auxin efflux carrier complex IEP Predict GO terms from Neighborhoods
BP GO:0009942 longitudinal axis specification IEP Predict GO terms from Neighborhoods
BP GO:0010029 regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010202 response to low fluence red light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010226 response to lithium ion IEP Predict GO terms from Neighborhoods
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010338 leaf formation IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010737 protein kinase A signaling IEP Predict GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
MF GO:0015248 sterol transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015485 cholesterol binding IEP Predict GO terms from Neighborhoods
CC GO:0016328 lateral plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0016331 morphogenesis of embryonic epithelium IEP Predict GO terms from Neighborhoods
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predict GO terms from Neighborhoods
MF GO:0019199 transmembrane receptor protein kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0019897 extrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0019898 extrinsic component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0019953 sexual reproduction IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0022600 digestive system process IEP Predict GO terms from Neighborhoods
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022604 regulation of cell morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0022607 cellular component assembly IEP Predict GO terms from Neighborhoods
BP GO:0022617 extracellular matrix disassembly IEP Predict GO terms from Neighborhoods
CC GO:0030027 lamellipodium IEP Predict GO terms from Neighborhoods
BP GO:0030029 actin filament-based process IEP Predict GO terms from Neighborhoods
BP GO:0030036 actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0030046 parallel actin filament bundle assembly IEP Predict GO terms from Neighborhoods
CC GO:0030055 cell-substrate junction IEP Predict GO terms from Neighborhoods
CC GO:0030175 filopodium IEP Predict GO terms from Neighborhoods
BP GO:0030301 cholesterol transport IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0030479 actin cortical patch IEP Predict GO terms from Neighborhoods
MF GO:0030570 pectate lyase activity IEP Predict GO terms from Neighborhoods
CC GO:0030863 cortical cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0030864 cortical actin cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0030866 cortical actin cytoskeleton organization IEP Predict GO terms from Neighborhoods
CC GO:0031097 medial cortex IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031594 neuromuscular junction IEP Predict GO terms from Neighborhoods
MF GO:0032052 bile acid binding IEP Predict GO terms from Neighborhoods
BP GO:0032091 negative regulation of protein binding IEP Predict GO terms from Neighborhoods
CC GO:0032420 stereocilium IEP Predict GO terms from Neighborhoods
CC GO:0032432 actin filament bundle IEP Predict GO terms from Neighborhoods
BP GO:0032530 regulation of microvillus organization IEP Predict GO terms from Neighborhoods
BP GO:0032532 regulation of microvillus length IEP Predict GO terms from Neighborhoods
BP GO:0032536 regulation of cell projection size IEP Predict GO terms from Neighborhoods
BP GO:0032879 regulation of localization IEP Predict GO terms from Neighborhoods
MF GO:0032934 sterol binding IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation IEP Predict GO terms from Neighborhoods
BP GO:0034316 negative regulation of Arp2/3 complex-mediated actin nucleation IEP Predict GO terms from Neighborhoods
BP GO:0035112 genitalia morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035126 post-embryonic genitalia morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0036213 contractile ring contraction IEP Predict GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0040018 positive regulation of multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0042110 T cell activation IEP Predict GO terms from Neighborhoods
BP GO:0042255 ribosome assembly IEP Predict GO terms from Neighborhoods
CC GO:0042641 actomyosin IEP Predict GO terms from Neighborhoods
CC GO:0042995 cell projection IEP Predict GO terms from Neighborhoods
CC GO:0043226 organelle IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0044396 actin cortical patch organization IEP Predict GO terms from Neighborhoods
BP GO:0045926 negative regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0046620 regulation of organ growth IEP Predict GO terms from Neighborhoods
BP GO:0046621 negative regulation of organ growth IEP Predict GO terms from Neighborhoods
CC GO:0046658 anchored component of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048563 post-embryonic animal organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048580 regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048598 embryonic morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048638 regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048640 negative regulation of developmental growth IEP Predict GO terms from Neighborhoods
BP GO:0048805 imaginal disc-derived genitalia morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048826 cotyledon morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0050525 cutinase activity IEP Predict GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0050793 regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Predict GO terms from Neighborhoods
MF GO:0050839 cell adhesion molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0050892 intestinal absorption IEP Predict GO terms from Neighborhoods
BP GO:0051017 actin filament bundle assembly IEP Predict GO terms from Neighborhoods
BP GO:0051049 regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0051093 negative regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051094 positive regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051125 regulation of actin nucleation IEP Predict GO terms from Neighborhoods
BP GO:0051126 negative regulation of actin nucleation IEP Predict GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051510 regulation of unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0051639 actin filament network formation IEP Predict GO terms from Neighborhoods
BP GO:0051666 actin cortical patch localization IEP Predict GO terms from Neighborhoods
BP GO:0060088 auditory receptor cell stereocilium organization IEP Predict GO terms from Neighborhoods
BP GO:0060121 vestibular receptor cell stereocilium organization IEP Predict GO terms from Neighborhoods
BP GO:0060122 inner ear receptor cell stereocilium organization IEP Predict GO terms from Neighborhoods
BP GO:0060348 bone development IEP Predict GO terms from Neighborhoods
BP GO:0061572 actin filament bundle organization IEP Predict GO terms from Neighborhoods
CC GO:0061645 endocytic patch IEP Predict GO terms from Neighborhoods
BP GO:0065007 biological regulation IEP Predict GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Predict GO terms from Neighborhoods
BP GO:0070508 cholesterol import IEP Predict GO terms from Neighborhoods
BP GO:0070649 formin-nucleated actin cable assembly IEP Predict GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:0071323 cellular response to chitin IEP Predict GO terms from Neighborhoods
BP GO:0071801 regulation of podosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0071803 positive regulation of podosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0080086 stamen filament development IEP Predict GO terms from Neighborhoods
MF GO:0080161 auxin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080162 endoplasmic reticulum to cytosol auxin transport IEP Predict GO terms from Neighborhoods
CC GO:0090406 pollen tube IEP Predict GO terms from Neighborhoods
CC GO:0097517 contractile actin filament bundle IEP Predict GO terms from Neighborhoods
BP GO:0098693 regulation of synaptic vesicle cycle IEP Predict GO terms from Neighborhoods
MF GO:0098699 structural constituent of presynaptic actin cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0098858 actin-based cell projection IEP Predict GO terms from Neighborhoods
CC GO:0098862 cluster of actin-based cell projections IEP Predict GO terms from Neighborhoods
MF GO:0098918 structural constituent of synapse IEP Predict GO terms from Neighborhoods
CC GO:0099079 actin body IEP Predict GO terms from Neighborhoods
MF GO:0099181 structural constituent of presynapse IEP Predict GO terms from Neighborhoods
CC GO:0099738 cell cortex region IEP Predict GO terms from Neighborhoods
BP GO:0106001 intestinal hexose absorption IEP Predict GO terms from Neighborhoods
BP GO:0106027 neuron projection organization IEP Predict GO terms from Neighborhoods
BP GO:0110009 formin-nucleated actin cable organization IEP Predict GO terms from Neighborhoods
BP GO:0120009 intermembrane lipid transfer IEP Predict GO terms from Neighborhoods
MF GO:0120013 lipid transfer activity IEP Predict GO terms from Neighborhoods
MF GO:0120015 sterol transfer activity IEP Predict GO terms from Neighborhoods
MF GO:0120020 cholesterol transfer activity IEP Predict GO terms from Neighborhoods
CC GO:0120025 plasma membrane bounded cell projection IEP Predict GO terms from Neighborhoods
CC GO:0120106 mitotic actomyosin contractile ring, distal actin filament layer IEP Predict GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1900055 regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900057 positive regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900140 regulation of seedling development IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1902117 positive regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902404 mitotic actomyosin contractile ring contraction IEP Predict GO terms from Neighborhoods
BP GO:1902410 mitotic cytokinetic process IEP Predict GO terms from Neighborhoods
BP GO:1902458 positive regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:1902896 terminal web assembly IEP Predict GO terms from Neighborhoods
BP GO:1903078 positive regulation of protein localization to plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1904377 positive regulation of protein localization to cell periphery IEP Predict GO terms from Neighborhoods
BP GO:1904529 regulation of actin filament binding IEP Predict GO terms from Neighborhoods
BP GO:1904530 negative regulation of actin filament binding IEP Predict GO terms from Neighborhoods
BP GO:1904616 regulation of actin binding IEP Predict GO terms from Neighborhoods
BP GO:1904617 negative regulation of actin binding IEP Predict GO terms from Neighborhoods
BP GO:1905477 positive regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
CC GO:1990357 terminal web IEP Predict GO terms from Neighborhoods
BP GO:2000012 regulation of auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:2000026 regulation of multicellular organismal development IEP Predict GO terms from Neighborhoods
BP GO:2000035 regulation of stem cell division IEP Predict GO terms from Neighborhoods
BP GO:2000069 regulation of post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 60 145
IPR007117 Expansin_CBD 156 233
IPR036749 Expansin_CBD_sf 152 244
IPR036908 RlpA-like_sf 9 173
No external refs found!