SOLTUB.AGRIA.G00000021383


Description : Methionine--trna ligase, cytoplasmic


Gene families : OG_02_0015175 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021383
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_65


Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEA AHRD
BP GO:0001731 formation of translation preinitiation complex IEA AHRD
BP GO:0001937 negative regulation of endothelial cell proliferation IEA AHRD
MF GO:0004831 tyrosine-tRNA ligase activity IEA AHRD
MF GO:0005125 cytokine activity IEA AHRD
CC GO:0005615 extracellular space IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005844 polysome IEA AHRD
BP GO:0006437 tyrosyl-tRNA aminoacylation IEA AHRD
BP GO:0006915 apoptotic process IEA AHRD
BP GO:0006974 cellular response to DNA damage stimulus IEA AHRD
MF GO:0008047 enzyme activator activity IEA AHRD
CC GO:0009986 cell surface IEA AHRD
CC GO:0010494 cytoplasmic stress granule IEA AHRD
CC GO:0016282 eukaryotic 43S preinitiation complex IEA AHRD
CC GO:0016604 nuclear body IEA AHRD
CC GO:0017101 aminoacyl-tRNA synthetase multienzyme complex IEA AHRD
CC GO:0017102 methionyl glutamyl tRNA synthetase complex IEA AHRD
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:0046686 response to cadmium ion IEA AHRD
BP GO:0050900 leukocyte migration IEA AHRD
MF GO:0051020 GTPase binding IEA AHRD
BP GO:0070094 positive regulation of glucagon secretion IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000015 phosphopyruvate hydratase complex IEP Predict GO terms from Neighborhoods
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
CC GO:0000315 organellar large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0000966 RNA 5'-end processing IEP Predict GO terms from Neighborhoods
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001217 DNA-binding transcription repressor activity IEP Predict GO terms from Neighborhoods
MF GO:0001227 DNA-binding transcription repressor activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
MF GO:0001530 lipopolysaccharide binding IEP Predict GO terms from Neighborhoods
BP GO:0001569 branching involved in blood vessel morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0001818 negative regulation of cytokine production IEP Predict GO terms from Neighborhoods
CC GO:0001917 photoreceptor inner segment IEP Predict GO terms from Neighborhoods
BP GO:0001944 vasculature development IEP Predict GO terms from Neighborhoods
BP GO:0002861 regulation of inflammatory response to antigenic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0002862 negative regulation of inflammatory response to antigenic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0002939 tRNA N1-guanine methylation IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004634 phosphopyruvate hydratase activity IEP Predict GO terms from Neighborhoods
MF GO:0004828 serine-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Predict GO terms from Neighborhoods
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Predict GO terms from Neighborhoods
CC GO:0005762 mitochondrial large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006007 glucose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006094 gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0006140 regulation of nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006337 nucleosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006400 tRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006434 seryl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006734 NADH metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006735 NADH regeneration IEP Predict GO terms from Neighborhoods
BP GO:0006839 mitochondrial transport IEP Predict GO terms from Neighborhoods
BP GO:0006937 regulation of muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0007098 centrosome cycle IEP Predict GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008156 negative regulation of DNA replication IEP Predict GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008320 protein transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0009019 tRNA (guanine-N1-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010574 regulation of vascular endothelial growth factor production IEP Predict GO terms from Neighborhoods
BP GO:0010755 regulation of plasminogen activation IEP Predict GO terms from Neighborhoods
BP GO:0010756 positive regulation of plasminogen activation IEP Predict GO terms from Neighborhoods
BP GO:0010954 positive regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0010960 magnesium ion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0015288 porin activity IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016444 somatic cell DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0016525 negative regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0019319 hexose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019320 hexose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019774 proteasome core complex, beta-subunit complex IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0022829 wide pore channel activity IEP Predict GO terms from Neighborhoods
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030150 protein import into mitochondrial matrix IEP Predict GO terms from Neighborhoods
BP GO:0030308 negative regulation of cell growth IEP Predict GO terms from Neighborhoods
CC GO:0030426 growth cone IEP Predict GO terms from Neighborhoods
BP GO:0030488 tRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0030808 regulation of nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030810 positive regulation of nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031023 microtubule organizing center organization IEP Predict GO terms from Neighborhoods
BP GO:0032889 regulation of vacuole fusion, non-autophagic IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033108 mitochondrial respiratory chain complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0034515 proteasome storage granule IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0036064 ciliary basal body IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0043204 perikaryon IEP Predict GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044088 regulation of vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0045446 endothelial cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045765 regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045926 negative regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0045933 positive regulation of muscle contraction IEP Predict GO terms from Neighborhoods
BP GO:0045981 positive regulation of nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046365 monosaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046930 pore complex IEP Predict GO terms from Neighborhoods
BP GO:0048754 branching morphogenesis of an epithelial tube IEP Predict GO terms from Neighborhoods
BP GO:0050727 regulation of inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0050728 negative regulation of inflammatory response IEP Predict GO terms from Neighborhoods
MF GO:0052905 tRNA (guanine(9)-N(1))-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0061138 morphogenesis of a branching epithelium IEP Predict GO terms from Neighborhoods
BP GO:0061300 cerebellum vasculature development IEP Predict GO terms from Neighborhoods
BP GO:0061615 glycolytic process through fructose-6-phosphate IEP Predict GO terms from Neighborhoods
BP GO:0061620 glycolytic process through glucose-6-phosphate IEP Predict GO terms from Neighborhoods
BP GO:0061621 canonical glycolysis IEP Predict GO terms from Neighborhoods
BP GO:0061718 glucose catabolic process to pyruvate IEP Predict GO terms from Neighborhoods
BP GO:0065002 intracellular protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0070125 mitochondrial translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0070371 ERK1 and ERK2 cascade IEP Predict GO terms from Neighborhoods
BP GO:0070585 protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0070613 regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0071806 protein transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
BP GO:0090646 mitochondrial tRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0098760 response to interleukin-7 IEP Predict GO terms from Neighborhoods
BP GO:0098761 cellular response to interleukin-7 IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0098799 outer mitochondrial membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0099738 cell cortex region IEP Predict GO terms from Neighborhoods
MF GO:0140318 protein transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900037 regulation of cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:1900038 negative regulation of cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:1900371 regulation of purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900373 positive regulation of purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900542 regulation of purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900544 positive regulation of purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901342 regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901343 negative regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903297 regulation of hypoxia-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1903298 negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1903317 regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903319 positive regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903578 regulation of ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903580 positive regulation of ATP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903670 regulation of sprouting angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903671 negative regulation of sprouting angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:1904046 negative regulation of vascular endothelial growth factor production IEP Predict GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000181 negative regulation of blood vessel morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2001169 regulation of ATP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001171 positive regulation of ATP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001243 negative regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036282 Glutathione-S-Trfase_C_sf 68 149
IPR012340 NA-bd_OB-fold 448 596
IPR002547 tRNA-bd_dom 452 546
No external refs found!