SOLTUB.AGRIA.G00000021568

Description : Abc transporter c family member 10

Gene families : OG_02_0000632 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021568
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_169

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
CC	GO:0000325	plant-type vacuole	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005774	vacuolar membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006869	lipid transport	IEA	AHRD
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008281	sulfonylurea receptor activity	IEA	AHRD
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0008514	organic anion transmembrane transporter activity	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEA	AHRD
BP	GO:0009738	abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010243	response to organonitrogen compound	None	Extended
MF	GO:0010290	chlorophyll catabolite transmembrane transporter activity	IEA	AHRD
BP	GO:0014070	response to organic cyclic compound	IEA	AHRD
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015431	ABC-type glutathione S-conjugate transporter activity	IEA	AHRD
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015718	monocarboxylic acid transport	IEA	AHRD
BP	GO:0015849	organic acid transport	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active ion transmembrane transporter activity	IEA	AHRD
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
BP	GO:0030004	cellular monovalent inorganic cation homeostasis	None	Extended
BP	GO:0030007	cellular potassium ion homeostasis	IEA	AHRD
CC	GO:0030054	cell junction	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0032501	multicellular organismal process	IEA	AHRD
BP	GO:0034097	response to cytokine	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0042887	amide transmembrane transporter activity	None	Extended
BP	GO:0042908	xenobiotic transport	IEA	AHRD
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	IEA	AHRD
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046685	response to arsenic-containing substance	IEA	AHRD
BP	GO:0046942	carboxylic acid transport	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	IEA	AHRD
BP	GO:0048519	negative regulation of biological process	IEA	AHRD
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	IEA	AHRD
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055067	monovalent inorganic cation homeostasis	None	Extended
BP	GO:0055075	potassium ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0061687	detoxification of inorganic compound	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071345	cellular response to cytokine stimulus	IEA	AHRD
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	IEA	AHRD
BP	GO:0071715	icosanoid transport	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098590	plasma membrane region	IEA	AHRD
BP	GO:0098754	detoxification	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140115	export across plasma membrane	IEA	AHRD
BP	GO:0140352	export from cell	None	Extended
MF	GO:0140359	ABC-type transporter activity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901527	abscisic acid-activated signaling pathway involved in stomatal movement	IEA	AHRD
BP	GO:1901652	response to peptide	IEA	AHRD
MF	GO:1901682	sulfur compound transmembrane transporter activity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
MF	GO:1904680	peptide transmembrane transporter activity	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0002229	defense response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:0002237	response to molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0002239	response to oomycetes	IEP	Predict GO terms from Neighborhoods
BP	GO:0002832	negative regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0003013	circulatory system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003018	vascular process in circulatory system	IEP	Predict GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005506	iron ion binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005615	extracellular space	IEP	Predict GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009534	chloroplast thylakoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0009579	thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009627	systemic acquired resistance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009636	response to toxic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0009696	salicylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009812	flavonoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009813	flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009925	basal plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0010039	response to iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010041	response to iron(III) ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010224	response to UV-B	IEP	Predict GO terms from Neighborhoods
BP	GO:0010232	vascular transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015721	bile acid and bile salt transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015850	organic hydroxy compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015914	phospholipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016324	apical plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predict GO terms from Neighborhoods
BP	GO:0016999	antibiotic metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0018958	phenol-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019336	phenol-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019842	vitamin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0031406	carboxylic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0031418	L-ascorbic acid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031976	plastid thylakoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0032102	negative regulation of response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0032496	response to lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
MF	GO:0033759	flavone synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0033760	2'-deoxymugineic-acid 2'-dioxygenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034040	ATPase-coupled lipid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034785	salicylate 5-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042440	pigment metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042537	benzene-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043177	organic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0045486	naringenin 3-dioxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046148	pigment biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046244	salicylic acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0048029	monosaccharide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0048545	response to steroid hormone	IEP	Predict GO terms from Neighborhoods
MF	GO:0050525	cutinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050787	detoxification of mercury ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0051213	dioxygenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051552	flavone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051553	flavone biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0090406	pollen tube	IEP	Predict GO terms from Neighborhoods
BP	GO:0097237	cellular response to toxic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0098656	anion transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0120091	jasmonic acid hydrolase	IEP	Predict GO terms from Neighborhoods
BP	GO:0150104	transport across blood-brain barrier	IEP	Predict GO terms from Neighborhoods
BP	GO:1900150	regulation of defense response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:1900366	negative regulation of defense response to insect	IEP	Predict GO terms from Neighborhoods
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903825	organic acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000022	regulation of jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2000068	regulation of defense response to insect	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR036640	ABC1_TM_sf	440	735
IPR027417	P-loop_NTPase	746	973
IPR011527	ABC1_TM_dom	1044	1297
IPR011527	ABC1_TM_dom	490	706
IPR036640	ABC1_TM_sf	1034	1357
IPR027417	P-loop_NTPase	1389	1473
IPR003439	ABC_transporter-like_ATP-bd	768	902

External Links

No external refs found!

SOLTUB.AGRIA.G00000021568

Expression Profile

Co-expression Networks

Functional Annotation