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  5. SOLTUB.AGRIA.G00000021689

SOLTUB.AGRIA.G00000021689


Description : 30S ribosomal protein S18


Gene families : OG_02_0001862 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021689
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_194


Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA AHRD
MF GO:0019843 rRNA binding IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0004121 cystathionine beta-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0006103 2-oxoglutarate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006570 tyrosine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006572 tyrosine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006775 fat-soluble vitamin metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008483 transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009072 aromatic amino acid family metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009074 aromatic amino acid family catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010189 vitamin E biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016597 amino acid binding IEP Predict GO terms from Neighborhoods
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0031960 response to corticosteroid IEP Predict GO terms from Neighborhoods
MF GO:0033855 nicotianamine aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0042360 vitamin E metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0043177 organic acid binding IEP Predict GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046689 response to mercury ion IEP Predict GO terms from Neighborhoods
BP GO:0048545 response to steroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0051384 response to glucocorticoid IEP Predict GO terms from Neighborhoods
MF GO:0070547 L-tyrosine aminotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1901606 alpha-amino acid catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001648 Ribosomal_S18 150 197
IPR001648 Ribosomal_S18 142 200
IPR036870 Ribosomal_S18_sf 128 200
No external refs found!