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  5. SOLTUB.AGRIA.G00000021806

SOLTUB.AGRIA.G00000021806


Description : Polynucleotidyl transferase, Ribonuclease H fold


Gene families : OG_02_0027193 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021806
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_145


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000152 nuclear ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0001835 blastocyst hatching IEP Predict GO terms from Neighborhoods
BP GO:0002021 response to dietary excess IEP Predict GO terms from Neighborhoods
CC GO:0005680 anaphase-promoting complex IEP Predict GO terms from Neighborhoods
CC GO:0005815 microtubule organizing center IEP Predict GO terms from Neighborhoods
CC GO:0005816 spindle pole body IEP Predict GO terms from Neighborhoods
CC GO:0005819 spindle IEP Predict GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007064 mitotic sister chromatid cohesion IEP Predict GO terms from Neighborhoods
BP GO:0007080 mitotic metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0007095 mitotic G2 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007097 nuclear migration IEP Predict GO terms from Neighborhoods
BP GO:0007605 sensory perception of sound IEP Predict GO terms from Neighborhoods
MF GO:0008013 beta-catenin binding IEP Predict GO terms from Neighborhoods
MF GO:0008022 protein C-terminus binding IEP Predict GO terms from Neighborhoods
BP GO:0008587 imaginal disc-derived wing margin morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0008593 regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010450 inflorescence meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010972 negative regulation of G2/M transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predict GO terms from Neighborhoods
BP GO:0022416 chaeta development IEP Predict GO terms from Neighborhoods
BP GO:0030473 nuclear migration along microtubule IEP Predict GO terms from Neighborhoods
MF GO:0030570 pectate lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0031063 regulation of histone deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0031065 positive regulation of histone deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0031145 anaphase-promoting complex-dependent catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
BP GO:0031505 fungal-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0031915 positive regulation of synaptic plasticity IEP Predict GO terms from Neighborhoods
BP GO:0032873 negative regulation of stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
CC GO:0033597 mitotic checkpoint complex IEP Predict GO terms from Neighborhoods
BP GO:0035188 hatching IEP Predict GO terms from Neighborhoods
BP GO:0040020 regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0042058 regulation of epidermal growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042461 photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0043524 negative regulation of neuron apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043627 response to estrogen IEP Predict GO terms from Neighborhoods
BP GO:0044818 mitotic G2/M transition checkpoint IEP Predict GO terms from Neighborhoods
BP GO:0045444 fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045570 regulation of imaginal disc growth IEP Predict GO terms from Neighborhoods
BP GO:0045572 positive regulation of imaginal disc growth IEP Predict GO terms from Neighborhoods
BP GO:0045732 positive regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045747 positive regulation of Notch signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0046328 regulation of JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0046329 negative regulation of JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0048448 stamen morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048461 flower structural organization IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
BP GO:0050773 regulation of dendrite development IEP Predict GO terms from Neighborhoods
BP GO:0050872 white fat cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050954 sensory perception of mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051310 metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0051438 regulation of ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051443 positive regulation of ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0055106 ubiquitin-protein transferase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0060612 adipose tissue development IEP Predict GO terms from Neighborhoods
BP GO:0060613 fat pad development IEP Predict GO terms from Neighborhoods
BP GO:0061448 connective tissue development IEP Predict GO terms from Neighborhoods
BP GO:0070050 neuron cellular homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0070303 negative regulation of stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0070306 lens fiber cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0071684 organism emergence from protective structure IEP Predict GO terms from Neighborhoods
BP GO:0071852 fungal-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072384 organelle transport along microtubule IEP Predict GO terms from Neighborhoods
CC GO:0072686 mitotic spindle IEP Predict GO terms from Neighborhoods
BP GO:0090128 regulation of synapse maturation IEP Predict GO terms from Neighborhoods
BP GO:0090129 positive regulation of synapse maturation IEP Predict GO terms from Neighborhoods
BP GO:0090207 regulation of triglyceride metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090311 regulation of protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0090312 positive regulation of protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0090344 obsolete negative regulation of cell aging IEP Predict GO terms from Neighborhoods
MF GO:0097027 ubiquitin-protein transferase activator activity IEP Predict GO terms from Neighborhoods
BP GO:1901993 regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901995 positive regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902102 regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902104 positive regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902750 negative regulation of cell cycle G2/M phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
BP GO:1903538 regulation of meiotic cell cycle process involved in oocyte maturation IEP Predict GO terms from Neighborhoods
BP GO:1904146 positive regulation of meiotic cell cycle process involved in oocyte maturation IEP Predict GO terms from Neighborhoods
BP GO:1904666 regulation of ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1904668 positive regulation of ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1905132 regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905134 positive regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905820 positive regulation of chromosome separation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR026960 RVT-Znf 28 117
No external refs found!