SOLTUB.AGRIA.G00000021891

Description : 1-aminocyclopropane-1-carboxylate oxidase

Gene families : OG_02_0009454 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000021891
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_174

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004497	monooxygenase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IEA	AHRD
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005794	Golgi apparatus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009593	detection of chemical stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009620	response to fungus	IEA	AHRD
BP	GO:0009692	ethylene metabolic process	None	Extended
BP	GO:0009693	ethylene biosynthetic process	IEA	AHRD
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009720	detection of hormone stimulus	None	Extended
BP	GO:0009723	response to ethylene	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009726	detection of endogenous stimulus	None	Extended
BP	GO:0009727	detection of ethylene stimulus	IEA	AHRD
MF	GO:0009815	1-aminocyclopropane-1-carboxylate oxidase activity	IEA	AHRD
BP	GO:0009835	fruit ripening	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010029	regulation of seed germination	None	Extended
BP	GO:0010030	positive regulation of seed germination	IEA	AHRD
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0031406	carboxylic acid binding	None	Extended
MF	GO:0031418	L-ascorbic acid binding	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043177	organic acid binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043449	cellular alkene metabolic process	None	Extended
BP	GO:0043450	alkene biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0048029	monosaccharide binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048582	positive regulation of post-embryonic development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
MF	GO:0051213	dioxygenase activity	IEA	AHRD
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0051606	detection of stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071241	cellular response to inorganic substance	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071396	cellular response to lipid	None	Extended
BP	GO:0071398	cellular response to fatty acid	IEA	AHRD
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071731	response to nitric oxide	None	Extended
BP	GO:0071732	cellular response to nitric oxide	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901699	cellular response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1902170	cellular response to reactive nitrogen species	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000030	mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0000041	transition metal ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0000272	polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0000293	ferric-chelate reductase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0000329	fungal-type vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0002833	positive regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0003953	NAD+ nucleosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004364	glutathione transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005384	manganese ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006801	superoxide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006811	ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006812	cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006825	copper ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006826	iron ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006828	manganese ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006829	zinc ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006873	cellular ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006875	cellular metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006878	cellular copper ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006880	intracellular sequestering of iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007043	cell-cell junction assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009407	toxin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009704	de-etiolation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009830	cell wall modification involved in abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0009833	plant-type primary cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0009846	pollen germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010047	fruit dehiscence	IEP	Predict GO terms from Neighborhoods
MF	GO:0010294	abscisic acid glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010393	galacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015089	high-affinity copper ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015093	ferrous iron transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015679	plasma membrane copper ion transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0016021	integral component of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016722	oxidoreductase activity, acting on metal ions	IEP	Predict GO terms from Neighborhoods
MF	GO:0016757	glycosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016758	hexosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0019187	beta-1,4-mannosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019364	pyridine nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019677	NAD catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0019863	IgE binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0019865	immunoglobulin binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030001	metal ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0030003	cellular cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030026	cellular manganese ion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030599	pectinesterase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031224	intrinsic component of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031349	positive regulation of defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0033212	iron import into cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0033214	siderophore-dependent iron import into cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0034220	ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034329	cell junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034755	iron ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035434	copper ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0042545	cell wall modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0042592	homeostatic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043295	glutathione binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0043667	pollen wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0044277	cell wall disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0045216	cell-cell junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0045330	aspartyl esterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045488	pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045490	pectin catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0047215	indole-3-acetate beta-glucosyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047911	galacturan 1,4-alpha-galacturonidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048235	pollen sperm cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0048868	pollen tube development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048878	chemical homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0050135	NAD(P)+ nucleosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0050801	ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051238	sequestering of metal ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051651	maintenance of location in cell	IEP	Predict GO terms from Neighborhoods
MF	GO:0051753	mannan synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055065	metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055070	copper ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055071	manganese ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055072	iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055076	transition metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055080	cation homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055082	cellular chemical homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0060416	response to growth hormone	IEP	Predict GO terms from Neighborhoods
BP	GO:0071421	manganese ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071577	zinc ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0072341	modified amino acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072526	pyridine-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080148	negative regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods
BP	GO:0097577	sequestering of iron ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0098655	cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098657	import into cell	IEP	Predict GO terms from Neighborhoods
BP	GO:0098659	inorganic cation import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0098705	copper ion import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098771	inorganic ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0099587	inorganic ion import across plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1900367	positive regulation of defense response to insect	IEP	Predict GO terms from Neighborhoods
MF	GO:1900750	oligopeptide binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1901678	iron coordination entity transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2000070	regulation of response to water deprivation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR026992	DIOX_N	4	107
IPR005123	Oxoglu/Fe-dep_dioxygenase	163	256

External Links

No external refs found!

SOLTUB.AGRIA.G00000021891

Expression Profile

Co-expression Networks

Functional Annotation