| CC | GO:0000427 | plastid-encoded plastid RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000900 | mRNA regulatory element binding translation repressor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002082 | regulation of oxidative phosphorylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004021 | L-alanine:2-oxoglutarate aminotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004372 | glycine hydroxymethyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004791 | thioredoxin-disulfide reductase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005506 | iron ion binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005758 | mitochondrial intermembrane space | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005777 | peroxisome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0005983 | starch catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006144 | purine nucleobase metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006522 | alanine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006524 | alanine catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006544 | glycine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006545 | glycine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006565 | L-serine catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006662 | glycerol ether metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006714 | sesquiterpenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006730 | one-carbon metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006743 | ubiquinone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006783 | heme biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006801 | superoxide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006909 | phagocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007623 | circadian rhythm | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008237 | metallopeptidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008453 | alanine-glyoxylate transaminase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008974 | phosphoribulokinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009056 | catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009063 | cellular amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009078 | pyruvate family amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009080 | pyruvate family amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009113 | purine nucleobase biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009399 | nitrogen fixation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009503 | thylakoid light-harvesting complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009517 | PSII associated light-harvesting complex II | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009532 | plastid stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009535 | chloroplast thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009570 | chloroplast stroma | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009575 | chromoplast stroma | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009642 | response to light intensity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009644 | response to high light intensity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009657 | plastid organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009658 | chloroplast organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009668 | plastid membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009688 | abscisic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009704 | de-etiolation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009853 | photorespiration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009941 | chloroplast envelope | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010027 | thylakoid membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010114 | response to red light | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010196 | nonphotochemical quenching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010205 | photoinhibition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010206 | photosystem II repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010287 | plastoglobule | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010297 | heteropolysaccharide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010304 | PSII associated light-harvesting complex II catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010313 | phytochrome binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010319 | stromule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010380 | regulation of chlorophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0010598 | NAD(P)H dehydrogenase complex (plastoquinone) | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016106 | sesquiterpenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016122 | xanthophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016123 | xanthophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016160 | amylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016161 | beta-amylase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016209 | antioxidant activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016668 | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016822 | hydrolase activity, acting on acid carbon-carbon bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016823 | hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016824 | hydrolase activity, acting on acid halide bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0018786 | haloalkane dehalogenase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018884 | carbazole metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019120 | hydrolase activity, acting on acid halide bonds, in C-halide compounds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019206 | nucleoside kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019253 | reductive pentose-phosphate cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019264 | glycine biosynthetic process from serine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019430 | removal of superoxide radicals | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019685 | photosynthesis, dark reaction | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019840 | isoprenoid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030076 | light-harvesting complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030091 | protein repair | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031090 | organelle membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031154 | culmination involved in sorocarp development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031409 | pigment binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031676 | plasma membrane-derived thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031969 | chloroplast membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031970 | organelle envelope lumen | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031977 | thylakoid lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032544 | plastid translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033614 | chloroplast proton-transporting ATP synthase complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034198 | cellular response to amino acid starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034340 | response to type I interferon | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034357 | photosynthetic membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035999 | tetrahydrofolate interconversion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042168 | heme metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042170 | plastid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042579 | microbody | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042597 | periplasmic space | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042645 | mitochondrial nucleoid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042651 | thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0042717 | plasma membrane-derived chromatophore membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042743 | hydrogen peroxide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042744 | hydrogen peroxide catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042851 | L-alanine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043094 | cellular metabolic compound salvage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043155 | negative regulation of photosynthesis, light reaction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043289 | apocarotenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043446 | cellular alkane metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043448 | alkane catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043461 | proton-transporting ATP synthase complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044248 | cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045454 | cell redox homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046232 | carbazole catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046653 | tetrahydrofolate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046655 | folic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046914 | transition metal ion binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047134 | protein-disulfide reductase (NAD(P)) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047538 | 2-carboxy-D-arabinitol-1-phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047635 | alanine-oxo-acid transaminase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047958 | glycine:2-oxoglutarate aminotransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0048046 | apoplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048564 | photosystem I assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050891 | multicellular organismal water homeostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051540 | metal cluster binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051738 | xanthophyll binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051781 | positive regulation of cell division | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0052662 | zeaxanthin epoxidase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055035 | plastid thylakoid membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061024 | membrane organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061635 | regulation of protein complex stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062125 | regulation of mitochondrial gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070071 | proton-transporting two-sector ATPase complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070129 | regulation of mitochondrial translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070536 | protein K63-linked deubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070552 | BRISC complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070905 | serine binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071277 | cellular response to calcium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071369 | cellular response to ethylene stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080006 | internode patterning | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090056 | regulation of chlorophyll metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090227 | regulation of red or far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090229 | negative regulation of red or far-red light signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097428 | protein maturation by iron-sulfur cluster transfer | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097573 | glutathione oxidoreductase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098807 | chloroplast thylakoid membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098869 | cellular oxidant detoxification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099120 | socially cooperative development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0102229 | amylopectin maltohydrolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120253 | hydrocarbon catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901401 | regulation of tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901463 | regulation of tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901575 | organic substance catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901600 | strigolactone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901601 | strigolactone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901606 | alpha-amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902645 | tertiary alcohol biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903715 | regulation of aerobic respiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905156 | negative regulation of photosynthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990066 | energy quenching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990748 | cellular detoxification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990928 | response to amino acid starvation | IEP | Predict GO terms from Neighborhoods |