SOLTUB.AGRIA.G00000022066

Description : Transcription factor IWS1, putative

Gene families : OG_02_0015263 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022066
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_251

Type	GO Term	Name	Evidence	Source
BP	GO:0000414	regulation of histone H3-K36 methylation	None	Extended
MF	GO:0000993	RNA polymerase II complex binding	IEA	AHRD
MF	GO:0001098	basal transcription machinery binding	None	Extended
MF	GO:0001099	basal RNA polymerase II transcription machinery binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0006405	RNA export from nucleus	None	Extended
BP	GO:0006406	mRNA export from nucleus	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
MF	GO:0008134	transcription factor binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEA	AHRD
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010793	regulation of mRNA export from nucleus	IEA	AHRD
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
BP	GO:0016973	poly(A)+ mRNA export from nucleus	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0031056	regulation of histone modification	None	Extended
BP	GO:0031060	regulation of histone methylation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032239	regulation of nucleobase-containing compound transport	None	Extended
BP	GO:0032386	regulation of intracellular transport	None	Extended
BP	GO:0032784	regulation of DNA-templated transcription elongation	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034243	regulation of transcription elongation by RNA polymerase II	IEA	AHRD
BP	GO:0035065	regulation of histone acetylation	None	Extended
MF	GO:0043175	RNA polymerase core enzyme binding	None	Extended
BP	GO:0043401	steroid hormone mediated signaling pathway	None	Extended
BP	GO:0046822	regulation of nucleocytoplasmic transport	None	Extended
BP	GO:0046831	regulation of RNA export from nucleus	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050657	nucleic acid transport	None	Extended
BP	GO:0050658	RNA transport	None	Extended
BP	GO:0050684	regulation of mRNA processing	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051028	mRNA transport	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051236	establishment of RNA localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060303	obsolete regulation of nucleosome density	IEA	AHRD
BP	GO:0060341	regulation of cellular localization	None	Extended
MF	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0070063	RNA polymerase binding	None	Extended
BP	GO:0070827	obsolete chromatin maintenance	IEA	AHRD
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090239	regulation of histone H4 acetylation	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140297	DNA-binding transcription factor binding	None	Extended
BP	GO:1901983	regulation of protein acetylation	None	Extended
BP	GO:1903311	regulation of mRNA metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000197	regulation of ribonucleoprotein complex localization	None	Extended
BP	GO:2000756	regulation of peptidyl-lysine acetylation	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended
BP	GO:2001253	regulation of histone H3-K36 trimethylation	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0004631	phosphomevalonate kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005777	peroxisome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006084	acetyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006163	purine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006637	acyl-CoA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006694	steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006896	Golgi to vacuole transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007015	actin filament organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007029	endoplasmic reticulum organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007030	Golgi organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0007041	lysosomal transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0008202	steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008284	positive regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009259	ribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009504	cell plate	IEP	Predict GO terms from Neighborhoods
BP	GO:0009637	response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009658	chloroplast organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009902	chloroplast relocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009903	chloroplast avoidance movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0009904	chloroplast accumulation movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0009913	epidermal cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010142	farnesyl diphosphate biosynthetic process, mevalonate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010975	regulation of neuron projection development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010977	negative regulation of neuron projection development	IEP	Predict GO terms from Neighborhoods
CC	GO:0014069	postsynaptic density	IEP	Predict GO terms from Neighborhoods
BP	GO:0016125	sterol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016126	sterol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016191	synaptic vesicle uncoating	IEP	Predict GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016482	cytosolic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0019287	isopentenyl diphosphate biosynthetic process, mevalonate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019693	ribose phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019750	chloroplast localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030100	regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030104	water homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030276	clathrin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030332	cyclin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030425	dendrite	IEP	Predict GO terms from Neighborhoods
BP	GO:0030855	epithelial cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0031344	regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031345	negative regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0031593	polyubiquitin modification-dependent protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0032050	clathrin heavy chain binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033561	regulation of water loss via skin	IEP	Predict GO terms from Neighborhoods
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034067	protein localization to Golgi apparatus	IEP	Predict GO terms from Neighborhoods
BP	GO:0035295	tube development	IEP	Predict GO terms from Neighborhoods
BP	GO:0035383	thioester metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035622	intrahepatic bile duct development	IEP	Predict GO terms from Neighborhoods
CC	GO:0043005	neuron projection	IEP	Predict GO terms from Neighborhoods
BP	GO:0045337	farnesyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045338	farnesyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045806	negative regulation of endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045926	negative regulation of growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048193	Golgi vesicle transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0048259	regulation of receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048261	negative regulation of receptor-mediated endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048853	forebrain morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048871	multicellular organismal homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050878	regulation of body fluid levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0050891	multicellular organismal water homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051051	negative regulation of transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0051129	negative regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051261	protein depolymerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051640	organelle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051644	plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051656	establishment of organelle localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051667	establishment of plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051668	localization within membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0061009	common bile duct development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061436	establishment of skin barrier	IEP	Predict GO terms from Neighborhoods
BP	GO:0071478	cellular response to radiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071482	cellular response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071483	cellular response to blue light	IEP	Predict GO terms from Neighborhoods
BP	GO:0072318	clathrin coat disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0072319	vesicle uncoating	IEP	Predict GO terms from Neighborhoods
BP	GO:0072521	purine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072657	protein localization to membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0072659	protein localization to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0080183	response to photooxidative stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0090160	Golgi to lysosome transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0099572	postsynaptic specialization	IEP	Predict GO terms from Neighborhoods
BP	GO:0120035	regulation of plasma membrane bounded cell projection organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0140030	modification-dependent protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1900186	negative regulation of clathrin-dependent endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902767	isoprenoid biosynthetic process via mevalonate	IEP	Predict GO terms from Neighborhoods
BP	GO:1990778	protein localization to cell periphery	IEP	Predict GO terms from Neighborhoods
BP	GO:2000177	regulation of neural precursor cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000179	positive regulation of neural precursor cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000369	regulation of clathrin-dependent endocytosis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR017923	TFIIS_N	346	391

External Links

No external refs found!

SOLTUB.AGRIA.G00000022066

Expression Profile

Co-expression Networks

Functional Annotation